RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NCR3O14931 201 aa6.9□□□□□ -1.3
HLA-B-254ENST00000497377 SPANXB1Q9NS25 103 aaPredicted RBP6.9□□□□□ -1.3
HLA-B-254ENST00000497377 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
HLA-B-254ENST00000497377 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
HLA-B-254ENST00000497377 ADAMTSL4-AS1Q5T5F5 129 aa6.89□□□□□ -1.31
HLA-B-254ENST00000497377 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
HLA-B-254ENST00000497377 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
HLA-B-254ENST00000497377 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
HLA-B-254ENST00000497377 ATOH7Q8N100 152 aa6.88□□□□□ -1.31
HLA-B-254ENST00000497377 LITAFQ99732 161 aa6.88□□□□□ -1.31
HLA-B-254ENST00000497377 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 TNXBP22105 4242 aa6.87□□□□□ -1.31
HLA-B-254ENST00000497377 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 DDTP30046 118 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 SPRR1AP35321 89 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 PRLHP81277 87 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 SCGB1D4Q6XE38 83 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 PRR26Q8N8Z3 221 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 COPS9Q8WXC6 57 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 CBY1Q9Y3M2 126 aa6.86□□□□□ -1.31
HLA-B-254ENST00000497377 NPC2P61916 151 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 Q6ZVH6 145 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 SPANXDQ9BXN6 97 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
HLA-B-254ENST00000497377 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
HLA-B-254ENST00000497377 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
HLA-B-254ENST00000497377 IGLV6-57P01721 117 aa6.84□□□□□ -1.31
HLA-B-254ENST00000497377 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
HLA-B-254ENST00000497377 CRYGAP11844 174 aa6.83□□□□□ -1.32
HLA-B-254ENST00000497377 IFITM1P13164 125 aa6.83□□□□□ -1.32
HLA-B-254ENST00000497377 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
HLA-B-254ENST00000497377 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
HLA-B-254ENST00000497377 SCGB1D1O95968 90 aa6.82□□□□□ -1.32
HLA-B-254ENST00000497377 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
HLA-B-254ENST00000497377 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
HLA-B-254ENST00000497377 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
HLA-B-254ENST00000497377 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
HLA-B-254ENST00000497377 B5MCH6 92 aa6.79□□□□□ -1.32
HLA-B-254ENST00000497377 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
HLA-B-254ENST00000497377 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
HLA-B-254ENST00000497377 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
HLA-B-254ENST00000497377 A0A087X002 238 aa6.78□□□□□ -1.32
HLA-B-254ENST00000497377 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
HLA-B-254ENST00000497377 Q6ZRX8 168 aa6.78□□□□□ -1.32
HLA-B-254ENST00000497377 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
HLA-B-254ENST00000497377 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
HLA-B-254ENST00000497377 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
HLA-B-254ENST00000497377 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
HLA-B-254ENST00000497377 C9orf118A6NHY6 69 aa6.76□□□□□ -1.33
HLA-B-254ENST00000497377 MUSTN1Q8IVN3 82 aa6.76□□□□□ -1.33
HLA-B-254ENST00000497377 ANAPC11Q9NYG5 84 aa6.76□□□□□ -1.33
HLA-B-254ENST00000497377 COX8AP10176 69 aa6.75□□□□□ -1.33
HLA-B-254ENST00000497377 TRAV13-2A0A0B4J235 113 aa6.74□□□□□ -1.33
HLA-B-254ENST00000497377 DLEU1O43261 78 aa6.74□□□□□ -1.33
HLA-B-254ENST00000497377 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
HLA-B-254ENST00000497377 Q9BRP9 147 aa6.74□□□□□ -1.33
HLA-B-254ENST00000497377 CTAG1AP78358 180 aa6.73□□□□□ -1.33
HLA-B-254ENST00000497377 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
HLA-B-254ENST00000497377 VAMP8Q9BV40 100 aa6.73□□□□□ -1.33
HLA-B-254ENST00000497377 TRBV7-6A0A0J9YX20 115 aa6.72□□□□□ -1.33
HLA-B-254ENST00000497377 A6NDN8 102 aa6.72□□□□□ -1.33
HLA-B-254ENST00000497377 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
HLA-B-254ENST00000497377 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.33
HLA-B-254ENST00000497377 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
HLA-B-254ENST00000497377 ELOF1P60002 83 aaKnown RBP6.71□□□□□ -1.34
HLA-B-254ENST00000497377 C6orf99Q4VX62 202 aa6.71□□□□□ -1.34
HLA-B-254ENST00000497377 SPATA45Q537H7 98 aa6.71□□□□□ -1.34
HLA-B-254ENST00000497377 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
HLA-B-254ENST00000497377 COX7BP24311 80 aa6.7□□□□□ -1.34
HLA-B-254ENST00000497377 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
HLA-B-254ENST00000497377 LINC00304Q8N9R0 145 aa6.7□□□□□ -1.34
HLA-B-254ENST00000497377 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
HLA-B-254ENST00000497377 C3orf22Q8N5N4 141 aa6.69□□□□□ -1.34
HLA-B-254ENST00000497377 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
HLA-B-254ENST00000497377 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 A4D1N5 150 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 SLC25A34Q6PIV7 304 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
HLA-B-254ENST00000497377 TSPAN13O95857 204 aa6.66□□□□□ -1.34
HLA-B-254ENST00000497377 SMIM11BQ8TCY0 68 aa6.66□□□□□ -1.34
HLA-B-254ENST00000497377 VAMP3Q15836 100 aa6.65□□□□□ -1.34
HLA-B-254ENST00000497377 PYY3Q5JQD4 70 aa6.65□□□□□ -1.34
HLA-B-254ENST00000497377 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.34
HLA-B-254ENST00000497377 NHP2Q9NX24 153 aaKnown RBP6.65□□□□□ -1.34
HLA-B-254ENST00000497377 SPRR1BP22528 89 aa6.64□□□□□ -1.35
HLA-B-254ENST00000497377 TAL2Q16559 108 aa6.64□□□□□ -1.35
HLA-B-254ENST00000497377 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
HLA-B-254ENST00000497377 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
HLA-B-254ENST00000497377 MOBPQ13875 183 aa6.63□□□□□ -1.35
HLA-B-254ENST00000497377 PRR4Q16378 134 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms