RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 Q9BRP9 147 aa7.33□□□□□ -1.24
FN1-226ENST00000496542 TRAV23DV6A0A075B6W5 121 aa7.31□□□□□ -1.24
FN1-226ENST00000496542 NDUFC2O95298 119 aa7.31□□□□□ -1.24
FN1-226ENST00000496542 IGLV6-57P01721 117 aa7.31□□□□□ -1.24
FN1-226ENST00000496542 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
FN1-226ENST00000496542 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
FN1-226ENST00000496542 A0A0J9YXY3 114 aa7.29□□□□□ -1.24
FN1-226ENST00000496542 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
FN1-226ENST00000496542 ADAMTSL4-AS1Q5T5F5 129 aa7.29□□□□□ -1.24
FN1-226ENST00000496542 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
FN1-226ENST00000496542 COLCA2A8K830 154 aa7.28□□□□□ -1.24
FN1-226ENST00000496542 ZNF73O43830 326 aaPredicted RBP7.28□□□□□ -1.24
FN1-226ENST00000496542 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
FN1-226ENST00000496542 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
FN1-226ENST00000496542 SLC7A5P1Q8MH63 180 aa7.28□□□□□ -1.24
FN1-226ENST00000496542 E9PLD3 99 aa7.27□□□□□ -1.25
FN1-226ENST00000496542 Q8N377 158 aa7.27□□□□□ -1.25
FN1-226ENST00000496542 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
FN1-226ENST00000496542 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
FN1-226ENST00000496542 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
FN1-226ENST00000496542 SLC25A20O43772 301 aa7.25□□□□□ -1.25
FN1-226ENST00000496542 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
FN1-226ENST00000496542 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
FN1-226ENST00000496542 OR13C6PQ8NH95 151 aa7.24□□□□□ -1.25
FN1-226ENST00000496542 HINT1P49773 126 aaPredicted RBP7.23□□□□□ -1.25
FN1-226ENST00000496542 LINC00308Q8TCZ7 52 aa7.23□□□□□ -1.25
FN1-226ENST00000496542 SPANXCQ9NY87 97 aa7.23□□□□□ -1.25
FN1-226ENST00000496542 CBY1Q9Y3M2 126 aa7.23□□□□□ -1.25
FN1-226ENST00000496542 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
FN1-226ENST00000496542 LITAFQ99732 161 aa7.22□□□□□ -1.25
FN1-226ENST00000496542 HIST1H2BKO60814 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BJP06899 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BOP23527 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BBP33778 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BDP58876 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BCP62807 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST2H2BEQ16778 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.21□□□□□ -1.26
FN1-226ENST00000496542 LINC01545Q5VT33 79 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BHQ93079 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BNQ99877 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 HIST1H2BMQ99879 126 aa7.21□□□□□ -1.26
FN1-226ENST00000496542 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
FN1-226ENST00000496542 TIMM17BO60830 172 aa7.2□□□□□ -1.26
FN1-226ENST00000496542 C5orf52A6NGY3 159 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 KRTAP4-1Q9BYQ7 146 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
FN1-226ENST00000496542 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
FN1-226ENST00000496542 SPRR1BP22528 89 aa7.17□□□□□ -1.26
FN1-226ENST00000496542 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
FN1-226ENST00000496542 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
FN1-226ENST00000496542 COX7BP24311 80 aa7.16□□□□□ -1.26
FN1-226ENST00000496542 XP32Q5T750 250 aa7.16□□□□□ -1.26
FN1-226ENST00000496542 C3orf79P0CE67 100 aa7.15□□□□□ -1.26
FN1-226ENST00000496542 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.26
FN1-226ENST00000496542 ELOF1P60002 83 aaKnown RBP7.15□□□□□ -1.26
FN1-226ENST00000496542 C6orf99Q4VX62 202 aa7.15□□□□□ -1.26
FN1-226ENST00000496542 LIMD2Q9BT23 127 aa7.15□□□□□ -1.26
FN1-226ENST00000496542 LAMTOR3Q9UHA4 124 aa7.15□□□□□ -1.26
FN1-226ENST00000496542 KRTDAPP60985 99 aa7.14□□□□□ -1.27
FN1-226ENST00000496542 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
FN1-226ENST00000496542 Q1RN00 199 aa7.13□□□□□ -1.27
FN1-226ENST00000496542 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
FN1-226ENST00000496542 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
FN1-226ENST00000496542 TAL2Q16559 108 aa7.12□□□□□ -1.27
FN1-226ENST00000496542 C20orf202A1L168 122 aa7.1□□□□□ -1.27
FN1-226ENST00000496542 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
FN1-226ENST00000496542 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
FN1-226ENST00000496542 TEX49A0A1B0GTD5 131 aa7.09□□□□□ -1.27
FN1-226ENST00000496542 A6NDN8 102 aa7.09□□□□□ -1.27
FN1-226ENST00000496542 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
FN1-226ENST00000496542 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
FN1-226ENST00000496542 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
FN1-226ENST00000496542 TRBV7-6A0A0J9YX20 115 aa7.08□□□□□ -1.28
FN1-226ENST00000496542 H7C2G1 150 aa7.08□□□□□ -1.28
FN1-226ENST00000496542 IFITM1P13164 125 aa7.08□□□□□ -1.28
FN1-226ENST00000496542 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
FN1-226ENST00000496542 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
FN1-226ENST00000496542 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
FN1-226ENST00000496542 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
FN1-226ENST00000496542 CD164Q04900 197 aa7.07□□□□□ -1.28
FN1-226ENST00000496542 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
FN1-226ENST00000496542 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
FN1-226ENST00000496542 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
FN1-226ENST00000496542 Q6ZVH6 145 aa7.05□□□□□ -1.28
FN1-226ENST00000496542 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
FN1-226ENST00000496542 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
FN1-226ENST00000496542 AKR1D1P51857 326 aa7.04□□□□□ -1.28
FN1-226ENST00000496542 IGLV8-61A0A075B6I0 122 aa7.03□□□□□ -1.28
FN1-226ENST00000496542 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
FN1-226ENST00000496542 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
FN1-226ENST00000496542 A4D1N5 150 aa7.01□□□□□ -1.29
FN1-226ENST00000496542 C1orf195Q5TG92 126 aa7.01□□□□□ -1.29
FN1-226ENST00000496542 SMIM11BQ8TCY0 68 aa7.01□□□□□ -1.29
FN1-226ENST00000496542 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
FN1-226ENST00000496542 Q5XG85 94 aa7□□□□□ -1.29
FN1-226ENST00000496542 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms