RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 FAM19A1Q7Z5A9 133 aa11.25□□□□□ -0.61
TSSC4-210ENST00000496468 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
TSSC4-210ENST00000496468 SPRR1AP35321 89 aa11.24□□□□□ -0.61
TSSC4-210ENST00000496468 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
TSSC4-210ENST00000496468 A0A0B4J2C4 111 aa11.22□□□□□ -0.61
TSSC4-210ENST00000496468 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
TSSC4-210ENST00000496468 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
TSSC4-210ENST00000496468 RPL28P46779 137 aaKnown RBP11.22□□□□□ -0.61
TSSC4-210ENST00000496468 DIRC1Q969H9 104 aa11.22□□□□□ -0.61
TSSC4-210ENST00000496468 RAB37Q96AX2 223 aa11.22□□□□□ -0.61
TSSC4-210ENST00000496468 CFC1BP0CG36 223 aa11.21□□□□□ -0.61
TSSC4-210ENST00000496468 CFC1P0CG37 223 aa11.21□□□□□ -0.61
TSSC4-210ENST00000496468 PRLHP81277 87 aa11.21□□□□□ -0.61
TSSC4-210ENST00000496468 ZNF861PO60384 105 aa11.2□□□□□ -0.62
TSSC4-210ENST00000496468 CTAG1AP78358 180 aa11.2□□□□□ -0.62
TSSC4-210ENST00000496468 ABCA13Q86UQ4 5058 aa11.19□□□□□ -0.62
TSSC4-210ENST00000496468 KRTAP4-16G5E9R7 235 aaPredicted RBP11.19□□□□□ -0.62
TSSC4-210ENST00000496468 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
TSSC4-210ENST00000496468 KRTAP13-1Q8IUC0 172 aa11.19□□□□□ -0.62
TSSC4-210ENST00000496468 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
TSSC4-210ENST00000496468 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
TSSC4-210ENST00000496468 M0R143 59 aa11.18□□□□□ -0.62
TSSC4-210ENST00000496468 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
TSSC4-210ENST00000496468 INAFM2P0DMQ5 153 aa11.17□□□□□ -0.62
TSSC4-210ENST00000496468 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
TSSC4-210ENST00000496468 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
TSSC4-210ENST00000496468 B5MCH6 92 aa11.16□□□□□ -0.62
TSSC4-210ENST00000496468 BVES-AS1Q5T3Y7 98 aa11.16□□□□□ -0.62
TSSC4-210ENST00000496468 Q6ZRX8 168 aa11.16□□□□□ -0.62
TSSC4-210ENST00000496468 H0Y9J4 135 aa11.15□□□□□ -0.62
TSSC4-210ENST00000496468 H7C2G1 150 aa11.15□□□□□ -0.62
TSSC4-210ENST00000496468 K7ERJ3 54 aa11.14□□□□□ -0.63
TSSC4-210ENST00000496468 HIGD2AQ9BW72 106 aa11.14□□□□□ -0.63
TSSC4-210ENST00000496468 PRO1854Q9UHT4 67 aa11.14□□□□□ -0.63
TSSC4-210ENST00000496468 Q1RN00 199 aa11.13□□□□□ -0.63
TSSC4-210ENST00000496468 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
TSSC4-210ENST00000496468 COX7BP24311 80 aa11.12□□□□□ -0.63
TSSC4-210ENST00000496468 ELOF1P60002 83 aaKnown RBP11.12□□□□□ -0.63
TSSC4-210ENST00000496468 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
TSSC4-210ENST00000496468 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
TSSC4-210ENST00000496468 Q9BRP9 147 aa11.09□□□□□ -0.63
TSSC4-210ENST00000496468 VAMP3Q15836 100 aa11.08□□□□□ -0.64
TSSC4-210ENST00000496468 BATFQ16520 125 aa11.07□□□□□ -0.64
TSSC4-210ENST00000496468 DHRS4-AS1Q9P1J3 65 aa11.07□□□□□ -0.64
TSSC4-210ENST00000496468 PCLOQ9Y6V0 5065 aa11.06□□□□□ -0.64
TSSC4-210ENST00000496468 TSPAN13O95857 204 aa11.04□□□□□ -0.64
TSSC4-210ENST00000496468 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
TSSC4-210ENST00000496468 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
TSSC4-210ENST00000496468 FAT3Q8TDW7 4589 aa11.03□□□□□ -0.64
TSSC4-210ENST00000496468 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
TSSC4-210ENST00000496468 TRIAP1O43715 76 aa11.01□□□□□ -0.65
TSSC4-210ENST00000496468 PSMB2P49721 201 aa11.01□□□□□ -0.65
TSSC4-210ENST00000496468 SLC25A20O43772 301 aa11□□□□□ -0.65
TSSC4-210ENST00000496468 KRTAP1-4P0C5Y4 121 aa11□□□□□ -0.65
TSSC4-210ENST00000496468 SPRR4Q96PI1 79 aa11□□□□□ -0.65
TSSC4-210ENST00000496468 FLG2Q5D862 2391 aaPredicted RBP11□□□□□ -0.65
TSSC4-210ENST00000496468 PCP4L1A6NKN8 68 aa10.99□□□□□ -0.65
TSSC4-210ENST00000496468 LINC00575Q6W349 94 aa10.98□□□□□ -0.65
TSSC4-210ENST00000496468 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
TSSC4-210ENST00000496468 H0YGX0 51 aa10.97□□□□□ -0.65
TSSC4-210ENST00000496468 OXTP01178 125 aa10.97□□□□□ -0.65
TSSC4-210ENST00000496468 COX6CP09669 75 aa10.96□□□□□ -0.65
TSSC4-210ENST00000496468 ST20-AS1Q8NBB2 130 aa10.96□□□□□ -0.65
TSSC4-210ENST00000496468 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
TSSC4-210ENST00000496468 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
TSSC4-210ENST00000496468 LINC01600Q96MT4 127 aa10.95□□□□□ -0.66
TSSC4-210ENST00000496468 FAM229BQ4G0N7 80 aa10.94□□□□□ -0.66
TSSC4-210ENST00000496468 ANAPC11Q9NYG5 84 aa10.94□□□□□ -0.66
TSSC4-210ENST00000496468 KRTAP29-1A8MX34 341 aaPredicted RBP10.93□□□□□ -0.66
TSSC4-210ENST00000496468 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
TSSC4-210ENST00000496468 SNHG12Q9BXW3 62 aa10.93□□□□□ -0.66
TSSC4-210ENST00000496468 SNCGO76070 127 aa10.92□□□□□ -0.66
TSSC4-210ENST00000496468 FAM218AQ96MZ4 157 aa10.92□□□□□ -0.66
TSSC4-210ENST00000496468 A0A087X002 238 aa10.91□□□□□ -0.66
TSSC4-210ENST00000496468 CRYGAP11844 174 aa10.91□□□□□ -0.66
TSSC4-210ENST00000496468 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
TSSC4-210ENST00000496468 CLEC2BQ92478 149 aa10.91□□□□□ -0.66
TSSC4-210ENST00000496468 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
TSSC4-210ENST00000496468 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.66
TSSC4-210ENST00000496468 Q6ZQY7 126 aa10.9□□□□□ -0.66
TSSC4-210ENST00000496468 A0A1B0GX51 115 aa10.89□□□□□ -0.67
TSSC4-210ENST00000496468 DEFB105AQ8NG35 78 aa10.89□□□□□ -0.67
TSSC4-210ENST00000496468 J3QL48 77 aa10.88□□□□□ -0.67
TSSC4-210ENST00000496468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
TSSC4-210ENST00000496468 TNXBP22105 4242 aa10.87□□□□□ -0.67
TSSC4-210ENST00000496468 IGLV5-48A0A075B6I7 105 aa10.87□□□□□ -0.67
TSSC4-210ENST00000496468 TEX49A0A1B0GTD5 131 aa10.87□□□□□ -0.67
TSSC4-210ENST00000496468 SPRR1BP22528 89 aa10.87□□□□□ -0.67
TSSC4-210ENST00000496468 LYRM7Q5U5X0 104 aa10.87□□□□□ -0.67
TSSC4-210ENST00000496468 TAX1BP3O14907 124 aa10.86□□□□□ -0.67
TSSC4-210ENST00000496468 H3BUT2 72 aa10.85□□□□□ -0.67
TSSC4-210ENST00000496468 DNAL4O96015 105 aa10.85□□□□□ -0.67
TSSC4-210ENST00000496468 MT1HL1P0DM35 61 aa10.85□□□□□ -0.67
TSSC4-210ENST00000496468 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
TSSC4-210ENST00000496468 KRTAP13-2Q52LG2 175 aa10.85□□□□□ -0.67
TSSC4-210ENST00000496468 COL5A1-AS1Q5SY13 56 aa10.85□□□□□ -0.67
TSSC4-210ENST00000496468 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
TSSC4-210ENST00000496468 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
TSSC4-210ENST00000496468 C9orf118A6NHY6 69 aa10.83□□□□□ -0.68
TSSC4-210ENST00000496468 LST1O00453 97 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms