RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PCP4P48539 62 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 Q8N814 137 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 FAM218AQ96MZ4 157 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 TENM3Q9P273 2699 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 CMYA5Q8N3K9 4069 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 TRBV10-3A0A0K0K1G6 114 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 VPREB1P12018 145 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 COX7BP24311 80 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 LINC00167Q96N53 147 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 WWC2-AS2Q96NR7 200 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
USP39-219ENST00000496047 ZNF73O43830 326 aaPredicted RBP4.56□□□□□ -1.68
USP39-219ENST00000496047 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
USP39-219ENST00000496047 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
USP39-219ENST00000496047 RYR1P21817 5038 aa4.56□□□□□ -1.68
USP39-219ENST00000496047 DNAH3Q8TD57 4116 aa4.56□□□□□ -1.68
USP39-219ENST00000496047 PRYO14603 147 aa4.55□□□□□ -1.68
USP39-219ENST00000496047 GAGE2AQ6NT46 116 aa4.55□□□□□ -1.68
USP39-219ENST00000496047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
USP39-219ENST00000496047 PDE6GP18545 87 aa4.54□□□□□ -1.68
USP39-219ENST00000496047 ELOF1P60002 83 aaKnown RBP4.54□□□□□ -1.68
USP39-219ENST00000496047 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
USP39-219ENST00000496047 Q6ZRP5 223 aa4.54□□□□□ -1.68
USP39-219ENST00000496047 LAMTOR3Q9UHA4 124 aa4.54□□□□□ -1.68
USP39-219ENST00000496047 IGLV5-37A0A075B6J1 123 aa4.53□□□□□ -1.68
USP39-219ENST00000496047 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
USP39-219ENST00000496047 ETDCA0A1B0GVM5 59 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 SLPIP03973 132 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 XGP55808 180 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 Q6Q795 121 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 Q8NDZ9 215 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 C14orf132Q9NPU4 83 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 DHRS4-AS1Q9P1J3 65 aa4.52□□□□□ -1.69
USP39-219ENST00000496047 NBDYA0A0U1RRE5 68 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 A0A1B0GV72 72 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 CNBPP62633 177 aaKnown RBP4.51□□□□□ -1.69
USP39-219ENST00000496047 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
USP39-219ENST00000496047 C9orf129Q5T035 196 aaKnown RBP4.51□□□□□ -1.69
USP39-219ENST00000496047 Q6ZQY7 126 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 OBSCN-AS1Q96MR7 158 aa4.51□□□□□ -1.69
USP39-219ENST00000496047 CCKP06307 115 aa4.5□□□□□ -1.69
USP39-219ENST00000496047 FAM19A5Q7Z5A7 132 aaPredicted RBP4.5□□□□□ -1.69
USP39-219ENST00000496047 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
USP39-219ENST00000496047 C7orf33Q8WU49 177 aa4.5□□□□□ -1.69
USP39-219ENST00000496047 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
USP39-219ENST00000496047 KCNQ1DNQ9H478 68 aa4.5□□□□□ -1.69
USP39-219ENST00000496047 LINC00474Q9P2X8 69 aa4.5□□□□□ -1.69
USP39-219ENST00000496047 HERC2O95714 4834 aa4.49□□□□□ -1.69
USP39-219ENST00000496047 C16orf90A8MZG2 172 aa4.49□□□□□ -1.69
USP39-219ENST00000496047 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
USP39-219ENST00000496047 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
USP39-219ENST00000496047 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
USP39-219ENST00000496047 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
USP39-219ENST00000496047 SERTAD4-AS1Q5TG53 156 aa4.48□□□□□ -1.69
USP39-219ENST00000496047 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
USP39-219ENST00000496047 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
USP39-219ENST00000496047 RYR2Q92736 4967 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 IGLV1-50A0A075B6I6 118 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.47□□□□□ -1.69
USP39-219ENST00000496047 TRBV7-7A0A0K0K1E9 115 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 Q6JHZ5 121 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 Q6ZRX8 168 aa4.47□□□□□ -1.69
USP39-219ENST00000496047 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.69
USP39-219ENST00000496047 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
USP39-219ENST00000496047 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
USP39-219ENST00000496047 UBE2BP63146 152 aa4.46□□□□□ -1.7
USP39-219ENST00000496047 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
USP39-219ENST00000496047 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
USP39-219ENST00000496047 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
USP39-219ENST00000496047 A0A096LNI7 61 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 F8WEM9 126 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 SPRR1AP35321 89 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 Q6ZQT0 140 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 C9orf163Q8N9P6 203 aa4.45□□□□□ -1.7
USP39-219ENST00000496047 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
USP39-219ENST00000496047 DYNC2H1Q8NCM8 4307 aaKnown RBP4.44□□□□□ -1.7
USP39-219ENST00000496047 A0A1B0GW54 56 aa4.43□□□□□ -1.7
USP39-219ENST00000496047 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP39-219ENST00000496047 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
USP39-219ENST00000496047 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 TRBV7-4A0A0J9YYF1 115 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 M0R2N4 97 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 DEFB105AQ8NG35 78 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
USP39-219ENST00000496047 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
USP39-219ENST00000496047 LRCOL1A6NCL2 159 aa4.41□□□□□ -1.7
USP39-219ENST00000496047 ATOX1O00244 68 aa4.41□□□□□ -1.7
USP39-219ENST00000496047 UBE2AP49459 152 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms