RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 S100A12P80511 92 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 Q8IZM0 81 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 C14orf144Q96I85 54 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 CAMK2N2Q96S95 79 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
VIM-207ENST00000495528 MYMXA0A1B0GTQ4 84 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 CNBPP62633 177 aaKnown RBP3.95□□□□□ -1.78
VIM-207ENST00000495528 SYCNQ0VAF6 134 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
VIM-207ENST00000495528 PCP2Q8IVA1 136 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 SPACA4Q8TDM5 124 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 LINC01600Q96MT4 127 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
VIM-207ENST00000495528 ZNF815PA8K554 130 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 F8WDY8 70 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 NDUFA1O15239 70 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 PFN2P35080 140 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 C9orf129Q5T035 196 aaKnown RBP3.94□□□□□ -1.78
VIM-207ENST00000495528 C12orf57Q99622 126 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 PRO1933Q9H354 126 aa3.94□□□□□ -1.78
VIM-207ENST00000495528 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.93□□□□□ -1.78
VIM-207ENST00000495528 SMIM6P0DI80 62 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 LINC00158P58513 81 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 KRTAP10-8P60410 259 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 CARD19Q96LW7 228 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
VIM-207ENST00000495528 A0A0J9YXY3 114 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 SMIM13P0DJ93 91 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 COX8AP10176 69 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 CXCL5P42830 114 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 MEIG1Q5JSS6 88 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 SCGB1D4Q6XE38 83 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 C7orf33Q8WU49 177 aa3.92□□□□□ -1.78
VIM-207ENST00000495528 IGLV8-61A0A075B6I0 122 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 TRBV30A0A0K0K1B3 111 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 PRR3P79522 188 aaKnown RBP3.91□□□□□ -1.78
VIM-207ENST00000495528 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 BOD1L2Q8IYS8 172 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 ERG28Q9UKR5 140 aa3.91□□□□□ -1.78
VIM-207ENST00000495528 LPAP08519 4548 aa3.9□□□□□ -1.78
VIM-207ENST00000495528 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 LINC00587B1AMM8 73 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 DLEU1O43261 78 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 NPC2P61916 151 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
VIM-207ENST00000495528 SFTA2Q6UW10 78 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 SPINK6Q6UWN8 80 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 CEND1Q8N111 149 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 DAND5Q8N907 189 aa3.9□□□□□ -1.79
VIM-207ENST00000495528 A0A096LNI7 61 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 COX17Q14061 63 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 MIR7-3HGQ8N6C7 128 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 MIEN1Q9BRT3 115 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 XAGE1AQ9HD64 81 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
VIM-207ENST00000495528 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 TIMM17BO60830 172 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 TLX1NBP0CAT3 122 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 MUSTN1Q8IVN3 82 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 SND1-IT1Q9HBX3 110 aa3.88□□□□□ -1.79
VIM-207ENST00000495528 TMEM238C9JI98 176 aa3.87□□□□□ -1.79
VIM-207ENST00000495528 TSTD3H0UI37 97 aa3.87□□□□□ -1.79
VIM-207ENST00000495528 C2orf91Q6ZV80 131 aa3.87□□□□□ -1.79
VIM-207ENST00000495528 HIGD1BQ9P298 99 aa3.87□□□□□ -1.79
VIM-207ENST00000495528 CTAG1AP78358 180 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 SPANXDQ9BXN6 97 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 SPANXCQ9NY87 97 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 MUC2Q02817 5179 aa3.86□□□□□ -1.79
VIM-207ENST00000495528 A0A1W2PNN7 141 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 PCP4L1A6NKN8 68 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 IFITM1P13164 125 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 Q6ZVH6 145 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 SPANXB1Q9NS25 103 aaPredicted RBP3.85□□□□□ -1.79
VIM-207ENST00000495528 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 PKIGQ9Y2B9 76 aa3.85□□□□□ -1.79
VIM-207ENST00000495528 LOC107984156A0A0G2JMH3 177 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 TAL2Q16559 108 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 FAM19A5Q7Z5A7 132 aaPredicted RBP3.84□□□□□ -1.79
VIM-207ENST00000495528 ARL17AQ8IVW1 177 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 Q8NDZ9 215 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 LINC00474Q9P2X8 69 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 C22orf24Q9Y442 160 aa3.84□□□□□ -1.79
VIM-207ENST00000495528 H0Y9J4 135 aa3.83□□□□□ -1.8
VIM-207ENST00000495528 NCR3O14931 201 aa3.83□□□□□ -1.8
VIM-207ENST00000495528 DDTP30046 118 aa3.83□□□□□ -1.8
VIM-207ENST00000495528 HINT1P49773 126 aaPredicted RBP3.83□□□□□ -1.8
VIM-207ENST00000495528 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
VIM-207ENST00000495528 COPS9Q8WXC6 57 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms