RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
COL27A1-208ENST00000494780 XP32Q5T750 250 aa12.9□□□□□ -0.34
COL27A1-208ENST00000494780 C9orf153Q5TBE3 101 aa12.9□□□□□ -0.34
COL27A1-208ENST00000494780 ZNF73O43830 326 aaPredicted RBP12.88□□□□□ -0.35
COL27A1-208ENST00000494780 IGKCP01834 107 aa12.88□□□□□ -0.35
COL27A1-208ENST00000494780 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
COL27A1-208ENST00000494780 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
COL27A1-208ENST00000494780 FABP4P15090 132 aa12.86□□□□□ -0.35
COL27A1-208ENST00000494780 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
COL27A1-208ENST00000494780 CBY1Q9Y3M2 126 aa12.85□□□□□ -0.35
COL27A1-208ENST00000494780 NPC2P61916 151 aa12.84□□□□□ -0.35
COL27A1-208ENST00000494780 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
COL27A1-208ENST00000494780 ST20-AS1Q8NBB2 130 aa12.84□□□□□ -0.35
COL27A1-208ENST00000494780 A0A0J9YXY3 114 aa12.83□□□□□ -0.36
COL27A1-208ENST00000494780 EIF4EBP3O60516 100 aaPredicted RBP12.83□□□□□ -0.36
COL27A1-208ENST00000494780 HINT1P49773 126 aaPredicted RBP12.83□□□□□ -0.36
COL27A1-208ENST00000494780 E9PLD3 99 aa12.79□□□□□ -0.36
COL27A1-208ENST00000494780 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-208ENST00000494780 SPRR1BP22528 89 aa12.78□□□□□ -0.36
COL27A1-208ENST00000494780 SLC25A34Q6PIV7 304 aa12.77□□□□□ -0.37
COL27A1-208ENST00000494780 LIMD2Q9BT23 127 aa12.76□□□□□ -0.37
COL27A1-208ENST00000494780 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
COL27A1-208ENST00000494780 DHRS4-AS1Q9P1J3 65 aa12.75□□□□□ -0.37
COL27A1-208ENST00000494780 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
COL27A1-208ENST00000494780 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
COL27A1-208ENST00000494780 LITAFQ99732 161 aa12.72□□□□□ -0.37
COL27A1-208ENST00000494780 TIMM17BO60830 172 aa12.71□□□□□ -0.37
COL27A1-208ENST00000494780 LCE2CQ5TA81 110 aa12.71□□□□□ -0.37
COL27A1-208ENST00000494780 LAMTOR3Q9UHA4 124 aa12.71□□□□□ -0.37
COL27A1-208ENST00000494780 HRCT1Q6UXD1 115 aa12.7□□□□□ -0.38
COL27A1-208ENST00000494780 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
COL27A1-208ENST00000494780 COLCA2A8K830 154 aa12.68□□□□□ -0.38
COL27A1-208ENST00000494780 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
COL27A1-208ENST00000494780 ELOF1P60002 83 aaKnown RBP12.66□□□□□ -0.38
COL27A1-208ENST00000494780 PCOTHQ58A44 107 aa12.66□□□□□ -0.38
COL27A1-208ENST00000494780 COX7BP24311 80 aa12.65□□□□□ -0.38
COL27A1-208ENST00000494780 CD164Q04900 197 aa12.64□□□□□ -0.39
COL27A1-208ENST00000494780 KRTAP19-2Q3LHN2 52 aa12.64□□□□□ -0.39
COL27A1-208ENST00000494780 LINC00518Q8N0U6 118 aa12.64□□□□□ -0.39
COL27A1-208ENST00000494780 C9orf92A6NGG3 77 aa12.63□□□□□ -0.39
COL27A1-208ENST00000494780 IGLV8-61A0A075B6I0 122 aa12.62□□□□□ -0.39
COL27A1-208ENST00000494780 ZNF815PA8K554 130 aa12.62□□□□□ -0.39
COL27A1-208ENST00000494780 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
COL27A1-208ENST00000494780 TAL2Q16559 108 aa12.61□□□□□ -0.39
COL27A1-208ENST00000494780 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
COL27A1-208ENST00000494780 PRO1933Q9H354 126 aa12.61□□□□□ -0.39
COL27A1-208ENST00000494780 Q1RN00 199 aa12.59□□□□□ -0.39
COL27A1-208ENST00000494780 TEX49A0A1B0GTD5 131 aa12.58□□□□□ -0.4
COL27A1-208ENST00000494780 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
COL27A1-208ENST00000494780 DEFB105AQ8NG35 78 aa12.58□□□□□ -0.4
COL27A1-208ENST00000494780 MT1HP80294 61 aa12.57□□□□□ -0.4
COL27A1-208ENST00000494780 CRCT1Q9UGL9 99 aa12.57□□□□□ -0.4
COL27A1-208ENST00000494780 TRBV7-6A0A0J9YX20 115 aa12.56□□□□□ -0.4
COL27A1-208ENST00000494780 H7C2G1 150 aa12.56□□□□□ -0.4
COL27A1-208ENST00000494780 Q5XG85 94 aa12.56□□□□□ -0.4
COL27A1-208ENST00000494780 TTTY13Q9BZ97 58 aa12.56□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BKO60814 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BJP06899 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 CFC1BP0CG36 223 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BOP23527 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BBP33778 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BDP58876 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BCP62807 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST2H2BEQ16778 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
COL27A1-208ENST00000494780 AKR1D1P51857 326 aa12.53□□□□□ -0.4
COL27A1-208ENST00000494780 SMIM29Q86T20 159 aa12.53□□□□□ -0.4
COL27A1-208ENST00000494780 FSIP2Q5CZC0 6907 aa12.53□□□□□ -0.4
COL27A1-208ENST00000494780 SLC7A5P1Q8MH63 180 aa12.52□□□□□ -0.41
COL27A1-208ENST00000494780 A0A1B0GWB2 263 aa12.51□□□□□ -0.41
COL27A1-208ENST00000494780 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
COL27A1-208ENST00000494780 IGLV5-48A0A075B6I7 105 aa12.49□□□□□ -0.41
COL27A1-208ENST00000494780 C1orf195Q5TG92 126 aa12.49□□□□□ -0.41
COL27A1-208ENST00000494780 SCGB1D4Q6XE38 83 aa12.48□□□□□ -0.41
COL27A1-208ENST00000494780 C3orf79P0CE67 100 aa12.47□□□□□ -0.41
COL27A1-208ENST00000494780 IFITM1P13164 125 aa12.47□□□□□ -0.41
COL27A1-208ENST00000494780 A6NDN8 102 aa12.45□□□□□ -0.42
COL27A1-208ENST00000494780 A4D1N5 150 aa12.43□□□□□ -0.42
COL27A1-208ENST00000494780 RPL37P61927 97 aaKnown RBP12.43□□□□□ -0.42
COL27A1-208ENST00000494780 Q6ZVH6 145 aa12.43□□□□□ -0.42
COL27A1-208ENST00000494780 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
COL27A1-208ENST00000494780 KRTDAPP60985 99 aa12.41□□□□□ -0.42
COL27A1-208ENST00000494780 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
COL27A1-208ENST00000494780 LORP23490 312 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-208ENST00000494780 MUSTN1Q8IVN3 82 aa12.39□□□□□ -0.43
COL27A1-208ENST00000494780 KRTAP10-6P60371 365 aaPredicted RBP12.38□□□□□ -0.43
COL27A1-208ENST00000494780 ANKRD39Q53RE8 183 aa12.38□□□□□ -0.43
COL27A1-208ENST00000494780 C20orf202A1L168 122 aa12.37□□□□□ -0.43
COL27A1-208ENST00000494780 TCL1BO95988 128 aa12.37□□□□□ -0.43
COL27A1-208ENST00000494780 TRAV13-2A0A0B4J235 113 aa12.36□□□□□ -0.43
COL27A1-208ENST00000494780 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
COL27A1-208ENST00000494780 SMIM11BQ8TCY0 68 aa12.34□□□□□ -0.43
COL27A1-208ENST00000494780 M0R2T5 61 aa12.33□□□□□ -0.44
COL27A1-208ENST00000494780 COX6B2Q6YFQ2 88 aa12.32□□□□□ -0.44
COL27A1-208ENST00000494780 PCP2Q8IVA1 136 aa12.32□□□□□ -0.44
COL27A1-208ENST00000494780 F8WEM9 126 aa12.3□□□□□ -0.44
COL27A1-208ENST00000494780 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms