RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 IGKCP01834 107 aa4.9□□□□□ -1.63
LRCH3-219ENST00000494069 PLNP26678 52 aa4.9□□□□□ -1.63
LRCH3-219ENST00000494069 LINC00337Q8N6G1 96 aa4.9□□□□□ -1.63
LRCH3-219ENST00000494069 MAP1LC3CQ9BXW4 147 aa4.9□□□□□ -1.63
LRCH3-219ENST00000494069 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 NPC2P61916 151 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 ADAMTSL4-AS1Q5T5F5 129 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
LRCH3-219ENST00000494069 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
LRCH3-219ENST00000494069 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
LRCH3-219ENST00000494069 DDTP30046 118 aa4.88□□□□□ -1.63
LRCH3-219ENST00000494069 HERVK_113P61574 105 aa4.88□□□□□ -1.63
LRCH3-219ENST00000494069 Q8NBF4 154 aa4.88□□□□□ -1.63
LRCH3-219ENST00000494069 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
LRCH3-219ENST00000494069 GAGE2AQ6NT46 116 aa4.87□□□□□ -1.63
LRCH3-219ENST00000494069 Q9BRP9 147 aa4.87□□□□□ -1.63
LRCH3-219ENST00000494069 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
LRCH3-219ENST00000494069 TRBV10-2A0A0K0K1G8 114 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 E9PLD3 99 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BOP23527 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BBP33778 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 NMUP48645 174 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BDP58876 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BCP62807 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST2H2BEQ16778 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 LINC00483Q53H64 154 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BHQ93079 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BNQ99877 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 HIST1H2BMQ99879 126 aa4.86□□□□□ -1.63
LRCH3-219ENST00000494069 SPANXB1Q9NS25 103 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-219ENST00000494069 SYS1-DBNDD2H3BUS1 97 aa4.85□□□□□ -1.63
LRCH3-219ENST00000494069 NDUFC2O95298 119 aa4.85□□□□□ -1.63
LRCH3-219ENST00000494069 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
LRCH3-219ENST00000494069 MIEN1Q9BRT3 115 aa4.85□□□□□ -1.63
LRCH3-219ENST00000494069 TTTY13Q9BZ97 58 aa4.85□□□□□ -1.63
LRCH3-219ENST00000494069 IGLV9-49A0A0B4J1Y8 123 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 CTAG1AP78358 180 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 MOBPQ13875 183 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 TPRXLQ17RH7 258 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 Q6ZRX8 168 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 LITAFQ99732 161 aa4.84□□□□□ -1.63
LRCH3-219ENST00000494069 TRAV23DV6A0A075B6W5 121 aa4.83□□□□□ -1.64
LRCH3-219ENST00000494069 S100A12P80511 92 aa4.83□□□□□ -1.64
LRCH3-219ENST00000494069 LINC01545Q5VT33 79 aa4.83□□□□□ -1.64
LRCH3-219ENST00000494069 ST20-AS1Q8NBB2 130 aa4.83□□□□□ -1.64
LRCH3-219ENST00000494069 ZNF73O43830 326 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-219ENST00000494069 C3orf79P0CE67 100 aa4.82□□□□□ -1.64
LRCH3-219ENST00000494069 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
LRCH3-219ENST00000494069 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
LRCH3-219ENST00000494069 PET117Q6UWS5 81 aa4.81□□□□□ -1.64
LRCH3-219ENST00000494069 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 SPINK1P00995 79 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 S100A1P23297 94 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 KRTDAPP60985 99 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
LRCH3-219ENST00000494069 TIMM17BO60830 172 aa4.79□□□□□ -1.64
LRCH3-219ENST00000494069 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
LRCH3-219ENST00000494069 Q8N377 158 aa4.79□□□□□ -1.64
LRCH3-219ENST00000494069 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
LRCH3-219ENST00000494069 JOSD1Q15040 202 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-219ENST00000494069 COA6Q5JTJ3 125 aaKnown RBP4.78□□□□□ -1.64
LRCH3-219ENST00000494069 C9orf153Q5TBE3 101 aa4.78□□□□□ -1.64
LRCH3-219ENST00000494069 A0A0U1RQV1 116 aa4.77□□□□□ -1.65
LRCH3-219ENST00000494069 ATOH7Q8N100 152 aa4.77□□□□□ -1.65
LRCH3-219ENST00000494069 HINT1P49773 126 aaPredicted RBP4.76□□□□□ -1.65
LRCH3-219ENST00000494069 C6orf99Q4VX62 202 aa4.76□□□□□ -1.65
LRCH3-219ENST00000494069 SPANXDQ9BXN6 97 aa4.76□□□□□ -1.65
LRCH3-219ENST00000494069 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
LRCH3-219ENST00000494069 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
LRCH3-219ENST00000494069 PCP2Q8IVA1 136 aa4.75□□□□□ -1.65
LRCH3-219ENST00000494069 SLC25A20O43772 301 aa4.74□□□□□ -1.65
LRCH3-219ENST00000494069 SPRR1BP22528 89 aa4.74□□□□□ -1.65
LRCH3-219ENST00000494069 COX7BP24311 80 aa4.74□□□□□ -1.65
LRCH3-219ENST00000494069 ELOF1P60002 83 aaKnown RBP4.74□□□□□ -1.65
LRCH3-219ENST00000494069 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
LRCH3-219ENST00000494069 SCGB1D4Q6XE38 83 aa4.74□□□□□ -1.65
LRCH3-219ENST00000494069 C5orf52A6NGY3 159 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 MUSTN1Q8IVN3 82 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 CBY1Q9Y3M2 126 aa4.73□□□□□ -1.65
LRCH3-219ENST00000494069 C20orf202A1L168 122 aa4.72□□□□□ -1.65
LRCH3-219ENST00000494069 TRIAP1O43715 76 aa4.72□□□□□ -1.65
LRCH3-219ENST00000494069 Q1RN00 199 aa4.72□□□□□ -1.65
LRCH3-219ENST00000494069 A0A0G2JQZ4 141 aa4.71□□□□□ -1.66
LRCH3-219ENST00000494069 A6NDN8 102 aa4.71□□□□□ -1.66
LRCH3-219ENST00000494069 TAL2Q16559 108 aa4.71□□□□□ -1.66
LRCH3-219ENST00000494069 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
LRCH3-219ENST00000494069 LAMTOR3Q9UHA4 124 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms