RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 RETNQ9HD89 108 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 WWC2-AS2Q96NR7 200 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 CYP4F30PQ9H0H9 118 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 NOP10Q9NPE3 64 aaKnown RBP4.76□□□□□ -1.65
EPHA3-203ENST00000494014 SLURP1P55000 103 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 UBE2BP63146 152 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 DNAH1Q9P2D7 4330 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 TRAV22A0A0B4J277 110 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
EPHA3-203ENST00000494014 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
EPHA3-203ENST00000494014 Q8NDZ9 215 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 C4orf3Q8WVX3 66 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 A0A1B0GW54 56 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 ODF3L2Q3SX64 289 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 Q8N9L7 120 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
EPHA3-203ENST00000494014 PSPHP1O15172 72 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 HIGD2BQ4VC39 106 aa4.74□□□□□ -1.65
EPHA3-203ENST00000494014 ELOF1P60002 83 aaKnown RBP4.73□□□□□ -1.65
EPHA3-203ENST00000494014 IGHV4-30-4P0DP06 118 aa4.73□□□□□ -1.65
EPHA3-203ENST00000494014 CELA1Q9UNI1 258 aa4.73□□□□□ -1.65
EPHA3-203ENST00000494014 PSCAO43653 123 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 NDUFB1O75438 58 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 UBE2AP49459 152 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 KHDC1LQ5JSQ8 128 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 LRCOL1A6NCL2 159 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 ZNF73O43830 326 aaPredicted RBP4.72□□□□□ -1.65
EPHA3-203ENST00000494014 SYCNQ0VAF6 134 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 C9orf116Q5BN46 136 aaPredicted RBP4.72□□□□□ -1.65
EPHA3-203ENST00000494014 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 LINC00269Q8N2A0 174 aa4.72□□□□□ -1.65
EPHA3-203ENST00000494014 CMC4P56277 68 aaPredicted RBP4.71□□□□□ -1.65
EPHA3-203ENST00000494014 DEFB136Q30KP8 78 aa4.71□□□□□ -1.65
EPHA3-203ENST00000494014 FAM30AQ9NZY2 134 aa4.71□□□□□ -1.65
EPHA3-203ENST00000494014 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
EPHA3-203ENST00000494014 NDUFS5O43920 106 aa4.71□□□□□ -1.66
EPHA3-203ENST00000494014 ETDCA0A1B0GVM5 59 aa4.71□□□□□ -1.66
EPHA3-203ENST00000494014 CHCHD10Q8WYQ3 142 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-203ENST00000494014 LINC00588Q9Y4M8 146 aa4.71□□□□□ -1.66
EPHA3-203ENST00000494014 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
EPHA3-203ENST00000494014 LINC00612Q8N6U2 182 aa4.7□□□□□ -1.66
EPHA3-203ENST00000494014 A8MUN3 132 aa4.7□□□□□ -1.66
EPHA3-203ENST00000494014 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
EPHA3-203ENST00000494014 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-203ENST00000494014 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 TGP01266 2768 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 SPAG11BQ08648 103 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 Q5VV11 94 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 KMT2CQ8NEZ4 4911 aaKnown RBP4.69□□□□□ -1.66
EPHA3-203ENST00000494014 C18orf65Q6ZTR6 163 aa4.69□□□□□ -1.66
EPHA3-203ENST00000494014 LYSTQ99698 3801 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 RYR3Q15413 4870 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 GYPEP15421 78 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 UNQ6190/PRO20217Q6UXQ8 127 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 C19orf73Q9NVV2 129 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 KLK12Q9UKR0 248 aa4.68□□□□□ -1.66
EPHA3-203ENST00000494014 RYR2Q92736 4967 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.67□□□□□ -1.66
EPHA3-203ENST00000494014 REG3AQ06141 175 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 LINC00528Q8N1L1 170 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 WNK1Q9H4A3 2382 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
EPHA3-203ENST00000494014 M0R378 163 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 GIG44P09565 113 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-203ENST00000494014 CSNK1G2-AS1Q8NCQ2 148 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 PHF5AQ7RTV0 110 aaKnown RBP4.66□□□□□ -1.66
EPHA3-203ENST00000494014 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 CHKB-CPT1BH3BT56 60 aa4.66□□□□□ -1.66
EPHA3-203ENST00000494014 NOTCH1P46531 2555 aa4.65□□□□□ -1.66
EPHA3-203ENST00000494014 C16orf90A8MZG2 172 aa4.65□□□□□ -1.66
EPHA3-203ENST00000494014 ANGP03950 147 aaKnown RBP4.65□□□□□ -1.66
EPHA3-203ENST00000494014 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.66
EPHA3-203ENST00000494014 IGLV10-54A0A075B6I4 117 aa4.65□□□□□ -1.67
EPHA3-203ENST00000494014 Q9BRP9 147 aa4.65□□□□□ -1.67
EPHA3-203ENST00000494014 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
EPHA3-203ENST00000494014 IGLV1-51P01701 117 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 PRB2P02812 416 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-203ENST00000494014 MP68P56378 58 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 Q8N9P0 234 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-203ENST00000494014 NOTCH3Q9UM47 2321 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 VPREB1P12018 145 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 CASC10Q5T4H9 136 aa4.64□□□□□ -1.67
EPHA3-203ENST00000494014 Q75L30 129 aa4.63□□□□□ -1.67
EPHA3-203ENST00000494014 KCNQ1DNQ9H478 68 aa4.63□□□□□ -1.67
EPHA3-203ENST00000494014 H3BPC8 53 aa4.63□□□□□ -1.67
EPHA3-203ENST00000494014 LINC00208Q96KT6 92 aa4.63□□□□□ -1.67
EPHA3-203ENST00000494014 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
EPHA3-203ENST00000494014 A6NN06 94 aa4.62□□□□□ -1.67
EPHA3-203ENST00000494014 DEFB130BP0DP73 79 aa4.62□□□□□ -1.67
EPHA3-203ENST00000494014 DEFB130AP0DP74 79 aa4.62□□□□□ -1.67
EPHA3-203ENST00000494014 PRR4Q16378 134 aa4.62□□□□□ -1.67
EPHA3-203ENST00000494014 XAGE1AQ9HD64 81 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms