RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 CTAG1AP78358 180 aa5.92□□□□□ -1.46
NUDCD3-210ENST00000493613 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
NUDCD3-210ENST00000493613 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
NUDCD3-210ENST00000493613 NDUFA12Q9UI09 145 aa5.92□□□□□ -1.46
NUDCD3-210ENST00000493613 DLEU1O43261 78 aa5.91□□□□□ -1.46
NUDCD3-210ENST00000493613 HERV-K104P63124 156 aa5.91□□□□□ -1.46
NUDCD3-210ENST00000493613 C3orf22Q8N5N4 141 aa5.91□□□□□ -1.46
NUDCD3-210ENST00000493613 MIEN1Q9BRT3 115 aa5.91□□□□□ -1.46
NUDCD3-210ENST00000493613 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
NUDCD3-210ENST00000493613 PCP2Q8IVA1 136 aa5.9□□□□□ -1.46
NUDCD3-210ENST00000493613 MEIG1Q5JSS6 88 aa5.89□□□□□ -1.47
NUDCD3-210ENST00000493613 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
NUDCD3-210ENST00000493613 PPDPFQ9H3Y8 114 aa5.89□□□□□ -1.47
NUDCD3-210ENST00000493613 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
NUDCD3-210ENST00000493613 SPAG11AQ6PDA7 123 aa5.88□□□□□ -1.47
NUDCD3-210ENST00000493613 COPS9Q8WXC6 57 aa5.88□□□□□ -1.47
NUDCD3-210ENST00000493613 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
NUDCD3-210ENST00000493613 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
NUDCD3-210ENST00000493613 SMIM13P0DJ93 91 aa5.87□□□□□ -1.47
NUDCD3-210ENST00000493613 TSPEAR-AS2P59090 65 aa5.87□□□□□ -1.47
NUDCD3-210ENST00000493613 SPRR4Q96PI1 79 aa5.87□□□□□ -1.47
NUDCD3-210ENST00000493613 NCR3O14931 201 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 DDTP30046 118 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 C4orf48Q5BLP8 95 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 ZNF706Q9Y5V0 76 aaPredicted RBP5.86□□□□□ -1.47
NUDCD3-210ENST00000493613 A0A0J9YXY3 114 aa5.85□□□□□ -1.47
NUDCD3-210ENST00000493613 TIMM17BO60830 172 aa5.85□□□□□ -1.47
NUDCD3-210ENST00000493613 MIR7-3HGQ8N6C7 128 aa5.85□□□□□ -1.47
NUDCD3-210ENST00000493613 M0R143 59 aa5.84□□□□□ -1.47
NUDCD3-210ENST00000493613 PRYO14603 147 aa5.84□□□□□ -1.47
NUDCD3-210ENST00000493613 Q6ZVH6 145 aa5.84□□□□□ -1.47
NUDCD3-210ENST00000493613 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
NUDCD3-210ENST00000493613 DAND5Q8N907 189 aa5.84□□□□□ -1.47
NUDCD3-210ENST00000493613 ETDCA0A1B0GVM5 59 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 HSD52Q0P140 79 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 TAL2Q16559 108 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 Q8NBF4 154 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 KCNQ1DNQ9H478 68 aa5.83□□□□□ -1.48
NUDCD3-210ENST00000493613 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
NUDCD3-210ENST00000493613 SPRR1AP35321 89 aa5.82□□□□□ -1.48
NUDCD3-210ENST00000493613 SPANXB1Q9NS25 103 aaPredicted RBP5.82□□□□□ -1.48
NUDCD3-210ENST00000493613 IFITM1P13164 125 aa5.81□□□□□ -1.48
NUDCD3-210ENST00000493613 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
NUDCD3-210ENST00000493613 C2orf91Q6ZV80 131 aa5.81□□□□□ -1.48
NUDCD3-210ENST00000493613 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 SPINK1P00995 79 aa5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 BATFQ16520 125 aa5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 SPANXDQ9BXN6 97 aa5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 SPANXCQ9NY87 97 aa5.8□□□□□ -1.48
NUDCD3-210ENST00000493613 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
NUDCD3-210ENST00000493613 A6NDN8 102 aa5.79□□□□□ -1.48
NUDCD3-210ENST00000493613 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
NUDCD3-210ENST00000493613 IGLV9-49A0A0B4J1Y8 123 aa5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 B5MCH6 92 aa5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 HINT1P49773 126 aaPredicted RBP5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 NPC2P61916 151 aa5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 LINC00483Q53H64 154 aa5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 CEND1Q8N111 149 aa5.78□□□□□ -1.48
NUDCD3-210ENST00000493613 ERC2-IT1O76042 136 aa5.77□□□□□ -1.49
NUDCD3-210ENST00000493613 MOBPQ13875 183 aa5.77□□□□□ -1.49
NUDCD3-210ENST00000493613 ADAMTSL4-AS1Q5T5F5 129 aa5.77□□□□□ -1.49
NUDCD3-210ENST00000493613 MUSTN1Q8IVN3 82 aa5.77□□□□□ -1.49
NUDCD3-210ENST00000493613 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
NUDCD3-210ENST00000493613 RAB37Q96AX2 223 aa5.76□□□□□ -1.49
NUDCD3-210ENST00000493613 LITAFQ99732 161 aa5.76□□□□□ -1.49
NUDCD3-210ENST00000493613 LOC107984156A0A0G2JMH3 177 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 BVES-AS1Q5T3Y7 98 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 ARL17AQ8IVW1 177 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 Q8N377 158 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 Q9BRP9 147 aa5.75□□□□□ -1.49
NUDCD3-210ENST00000493613 A4D1N5 150 aa5.74□□□□□ -1.49
NUDCD3-210ENST00000493613 Q6ZRX8 168 aa5.74□□□□□ -1.49
NUDCD3-210ENST00000493613 SSBP3-AS1Q7Z2R9 100 aa5.74□□□□□ -1.49
NUDCD3-210ENST00000493613 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
NUDCD3-210ENST00000493613 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
NUDCD3-210ENST00000493613 SLC25A20O43772 301 aa5.73□□□□□ -1.49
NUDCD3-210ENST00000493613 COL5A1-AS1Q5SY13 56 aa5.73□□□□□ -1.49
NUDCD3-210ENST00000493613 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 TRAV13-2A0A0B4J235 113 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 NDUFC2O95298 119 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 FXYD2P54710 66 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 Q1RN00 199 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 OR13C6PQ8NH95 151 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 CBY1Q9Y3M2 126 aa5.72□□□□□ -1.49
NUDCD3-210ENST00000493613 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
NUDCD3-210ENST00000493613 A0A0B4J2C4 111 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms