RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 C20orf197Q8N268 126 aa10.5□□□□□ -0.73
SEMA4D-220ENST00000492386 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
SEMA4D-220ENST00000492386 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
SEMA4D-220ENST00000492386 F8P00451 2351 aa10.48□□□□□ -0.73
SEMA4D-220ENST00000492386 CMYA5Q8N3K9 4069 aa10.48□□□□□ -0.73
SEMA4D-220ENST00000492386 TLX1NBP0CAT3 122 aa10.48□□□□□ -0.73
SEMA4D-220ENST00000492386 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.73
SEMA4D-220ENST00000492386 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.73
SEMA4D-220ENST00000492386 FAM19A5Q7Z5A7 132 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-220ENST00000492386 Q8N377 158 aa10.45□□□□□ -0.74
SEMA4D-220ENST00000492386 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-220ENST00000492386 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
SEMA4D-220ENST00000492386 LINC00588Q9Y4M8 146 aa10.45□□□□□ -0.74
SEMA4D-220ENST00000492386 DNAH3Q8TD57 4116 aa10.44□□□□□ -0.74
SEMA4D-220ENST00000492386 OXTP01178 125 aa10.44□□□□□ -0.74
SEMA4D-220ENST00000492386 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
SEMA4D-220ENST00000492386 FAM168BA1KXE4 195 aa10.43□□□□□ -0.74
SEMA4D-220ENST00000492386 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
SEMA4D-220ENST00000492386 MRAPQ8TCY5 172 aa10.43□□□□□ -0.74
SEMA4D-220ENST00000492386 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
SEMA4D-220ENST00000492386 Q6ZRX8 168 aa10.42□□□□□ -0.74
SEMA4D-220ENST00000492386 MAST4O15021 2626 aa10.42□□□□□ -0.74
SEMA4D-220ENST00000492386 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 RPL37AP8A6NKH3 93 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 Q9BRP9 147 aa10.41□□□□□ -0.74
SEMA4D-220ENST00000492386 H7BZZ5 65 aa10.4□□□□□ -0.74
SEMA4D-220ENST00000492386 NOTCH1P46531 2555 aa10.4□□□□□ -0.74
SEMA4D-220ENST00000492386 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
SEMA4D-220ENST00000492386 SPRR1AP35321 89 aa10.4□□□□□ -0.74
SEMA4D-220ENST00000492386 TM2D3Q9BRN9 247 aa10.4□□□□□ -0.74
SEMA4D-220ENST00000492386 PRYO14603 147 aa10.39□□□□□ -0.75
SEMA4D-220ENST00000492386 Q8N9L7 120 aa10.39□□□□□ -0.75
SEMA4D-220ENST00000492386 NREPQ16612 68 aa10.39□□□□□ -0.75
SEMA4D-220ENST00000492386 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
SEMA4D-220ENST00000492386 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
SEMA4D-220ENST00000492386 SNURFQ9Y675 71 aa10.37□□□□□ -0.75
SEMA4D-220ENST00000492386 FAM236DA0A1B0GTK5 79 aa10.36□□□□□ -0.75
SEMA4D-220ENST00000492386 FAM236CP0DP71 79 aa10.36□□□□□ -0.75
SEMA4D-220ENST00000492386 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
SEMA4D-220ENST00000492386 BPY2O14599 106 aa10.36□□□□□ -0.75
SEMA4D-220ENST00000492386 RMI2Q96E14 147 aa10.36□□□□□ -0.75
SEMA4D-220ENST00000492386 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
SEMA4D-220ENST00000492386 TNP2Q05952 138 aa10.35□□□□□ -0.75
SEMA4D-220ENST00000492386 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
SEMA4D-220ENST00000492386 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
SEMA4D-220ENST00000492386 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
SEMA4D-220ENST00000492386 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
SEMA4D-220ENST00000492386 ERC2-IT1O76042 136 aa10.31□□□□□ -0.76
SEMA4D-220ENST00000492386 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
SEMA4D-220ENST00000492386 BAHCC1Q9P281 2608 aa10.31□□□□□ -0.76
SEMA4D-220ENST00000492386 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
SEMA4D-220ENST00000492386 A0A1B0GW54 56 aa10.3□□□□□ -0.76
SEMA4D-220ENST00000492386 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
SEMA4D-220ENST00000492386 F8WEM9 126 aa10.29□□□□□ -0.76
SEMA4D-220ENST00000492386 EPM2AB3EWF7 344 aa10.29□□□□□ -0.76
SEMA4D-220ENST00000492386 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
SEMA4D-220ENST00000492386 Q8NBF4 154 aa10.28□□□□□ -0.76
SEMA4D-220ENST00000492386 K7EIL1 84 aa10.27□□□□□ -0.77
SEMA4D-220ENST00000492386 UBE2BP63146 152 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 Q5XG85 94 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 SERP1Q9Y6X1 66 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 NDUFC1O43677 76 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
SEMA4D-220ENST00000492386 SPRR4Q96PI1 79 aa10.25□□□□□ -0.77
SEMA4D-220ENST00000492386 HUWE1Q7Z6Z7 4374 aaKnown RBP10.25□□□□□ -0.77
SEMA4D-220ENST00000492386 SMIM29Q86T20 159 aa10.24□□□□□ -0.77
SEMA4D-220ENST00000492386 COL6A5A8TX70 2615 aa10.22□□□□□ -0.77
SEMA4D-220ENST00000492386 KRTAP1-5Q9BYS1 174 aa10.22□□□□□ -0.77
SEMA4D-220ENST00000492386 C4orf26Q17RF5 130 aa10.22□□□□□ -0.77
SEMA4D-220ENST00000492386 A0A096LNI7 61 aa10.21□□□□□ -0.78
SEMA4D-220ENST00000492386 A0A0U1RQV1 116 aa10.2□□□□□ -0.78
SEMA4D-220ENST00000492386 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
SEMA4D-220ENST00000492386 DSCR10P59022 87 aa10.19□□□□□ -0.78
SEMA4D-220ENST00000492386 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
SEMA4D-220ENST00000492386 LINC00476Q8WZB0 136 aa10.18□□□□□ -0.78
SEMA4D-220ENST00000492386 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
SEMA4D-220ENST00000492386 CNBPP62633 177 aaKnown RBP10.17□□□□□ -0.78
SEMA4D-220ENST00000492386 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
SEMA4D-220ENST00000492386 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
SEMA4D-220ENST00000492386 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-220ENST00000492386 PRLHP81277 87 aa10.16□□□□□ -0.78
SEMA4D-220ENST00000492386 K7EQZ3 153 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 IGFL1Q6UW32 110 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
SEMA4D-220ENST00000492386 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
SEMA4D-220ENST00000492386 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
SEMA4D-220ENST00000492386 LCE6AA0A183 80 aa10.12□□□□□ -0.79
SEMA4D-220ENST00000492386 PSCAO43653 123 aa10.11□□□□□ -0.79
SEMA4D-220ENST00000492386 LYSTQ99698 3801 aa10.11□□□□□ -0.79
SEMA4D-220ENST00000492386 IGLV8-61A0A075B6I0 122 aa10.11□□□□□ -0.79
SEMA4D-220ENST00000492386 MGAM2Q2M2H8 2515 aa10.1□□□□□ -0.79
SEMA4D-220ENST00000492386 FP248Q71RG6 208 aaPredicted RBP10.09□□□□□ -0.79
SEMA4D-220ENST00000492386 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms