RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ST20Q9HBF5 79 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 CDC42SE2Q9NRR3 84 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 TMEM242Q9NWH2 141 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 LINC00474Q9P2X8 69 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 PKIGQ9Y2B9 76 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 TNXBP22105 4242 aa1.56□□□□□ -2.16
PHC3-213ENST00000491258 SYNE2Q8WXH0 6885 aaKnown RBP1.56□□□□□ -2.16
PHC3-213ENST00000491258 A0A0J9YXV3 536 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 A0A1B0GUT8 65 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 A0A1W2PNN7 141 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 A6NDN8 102 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 HIGD1CA8MV81 97 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 SMKR1H3BMG3 65 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 TLX1NBP0CAT3 122 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 PSMB2P49721 201 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 NDUFA6P56556 154 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 SYCNQ0VAF6 134 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 SS18Q15532 418 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 ALKAL2Q6UX46 152 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 SCGB1D4Q6XE38 83 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 FAM19A1Q7Z5A9 133 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 AMN1Q8IY45 258 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 LINC00304Q8N9R0 145 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 COPS9Q8WXC6 57 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 PLEKHB2Q96CS7 222 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 CARD19Q96LW7 228 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 TMEM191AQ9H0A3 160 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 OSTCQ9NRP0 149 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 LRP2P98164 4655 aa1.55□□□□□ -2.16
PHC3-213ENST00000491258 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
PHC3-213ENST00000491258 TRBV24-1A0A075B6N3 115 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 TRAV13-1A0A0B4J241 112 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 LOC107984640A0A0U1RRK4 108 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 C7orf77A4D0Y5 90 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 C9JQL5 133 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 COX7A2LO14548 114 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 APOMO95445 188 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 PPP1R17O96001 155 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 SRP19P09132 144 aaKnown RBP1.54□□□□□ -2.16
PHC3-213ENST00000491258 MRPL51Q4U2R6 128 aaKnown RBP1.54□□□□□ -2.16
PHC3-213ENST00000491258 C9orf116Q5BN46 136 aaPredicted RBP1.54□□□□□ -2.16
PHC3-213ENST00000491258 MEIG1Q5JSS6 88 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 FAM104BQ5XKR9 115 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 C5orf38Q86SI9 138 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 NUP35Q8NFH5 326 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 RAB37Q96AX2 223 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 SMIM7Q9BQ49 75 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 C20orf78Q9BR46 151 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 EIF5A2Q9GZV4 153 aaKnown RBP1.54□□□□□ -2.16
PHC3-213ENST00000491258 UQCR10Q9UDW1 63 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 UBE2D4Q9Y2X8 147 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 V9GYV3 84 aa1.54□□□□□ -2.16
PHC3-213ENST00000491258 IGHV3OR16-9A0A0B4J2B5 98 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 FAM236DA0A1B0GTK5 79 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 SMIM27A0A1W2PRY6 76 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 ZNF727A8MUV8 499 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 SPINK8P0C7L1 97 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 FAM236CP0DP71 79 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 IFITM1P13164 125 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 FCER1GP30273 86 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 PFN2P35080 140 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 RPL23P62829 140 aaKnown RBP1.53□□□□□ -2.16
PHC3-213ENST00000491258 MRPS36P82909 103 aaKnown RBP1.53□□□□□ -2.16
PHC3-213ENST00000491258 ADIRFQ15847 76 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 RNASE13Q5GAN3 156 aaKnown RBP1.53□□□□□ -2.16
PHC3-213ENST00000491258 MRPL54Q6P161 138 aaKnown RBP1.53□□□□□ -2.16
PHC3-213ENST00000491258 UNQ6190/PRO20217Q6UXQ8 127 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 Q6ZUT4 128 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 CAMK2N2Q96S95 79 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 SEC11CQ9BY50 192 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 MRPL35Q9NZE8 188 aaKnown RBP1.53□□□□□ -2.16
PHC3-213ENST00000491258 PSORS1C2Q9UIG4 136 aa1.53□□□□□ -2.16
PHC3-213ENST00000491258 A0A1B0GXF2 115 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 D6R8Y8 96 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 MT-ND6P03923 174 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 IGLV7-43P04211 117 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 FABP4P15090 132 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 CKS2P33552 79 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 RPL39P62891 51 aaKnown RBP1.52□□□□□ -2.17
PHC3-213ENST00000491258 SPAG11BQ08648 103 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 C1orf137Q5JT78 98 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 TMEM136Q6ZRR5 245 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 PHF5AQ7RTV0 110 aaKnown RBP1.52□□□□□ -2.17
PHC3-213ENST00000491258 IMMP2LQ96T52 175 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 SMIM2Q9BVW6 85 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 IMUPQ9GZP8 106 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 C6orf48Q9UBA6 75 aa1.52□□□□□ -2.17
PHC3-213ENST00000491258 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 F8W1H4 67 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 NDUFA1O15239 70 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 NPYP01303 97 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 HBBP68871 147 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 C10orf91Q5T1B1 145 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 Q6Q795 121 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 C2orf82Q6UX34 121 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms