RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PLNP26678 52 aa8.65□□□□□ -1.02
PLOD3-216ENST00000489927 SVBPQ8N300 66 aa8.65□□□□□ -1.02
PLOD3-216ENST00000489927 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
PLOD3-216ENST00000489927 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
PLOD3-216ENST00000489927 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
PLOD3-216ENST00000489927 NMUP48645 174 aa8.64□□□□□ -1.03
PLOD3-216ENST00000489927 NPC2P61916 151 aa8.64□□□□□ -1.03
PLOD3-216ENST00000489927 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
PLOD3-216ENST00000489927 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
PLOD3-216ENST00000489927 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
PLOD3-216ENST00000489927 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
PLOD3-216ENST00000489927 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 HERVK_113P61574 105 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 NDUFA5Q16718 116 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 LIMD2Q9BT23 127 aa8.62□□□□□ -1.03
PLOD3-216ENST00000489927 DPM2O94777 84 aa8.61□□□□□ -1.03
PLOD3-216ENST00000489927 LINC00310P59036 64 aa8.61□□□□□ -1.03
PLOD3-216ENST00000489927 CFC1BP0CG36 223 aa8.6□□□□□ -1.03
PLOD3-216ENST00000489927 SPRR1BP22528 89 aa8.6□□□□□ -1.03
PLOD3-216ENST00000489927 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
PLOD3-216ENST00000489927 SERF1AO75920 110 aa8.59□□□□□ -1.03
PLOD3-216ENST00000489927 IGKCP01834 107 aa8.59□□□□□ -1.03
PLOD3-216ENST00000489927 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
PLOD3-216ENST00000489927 FABP4P15090 132 aa8.57□□□□□ -1.04
PLOD3-216ENST00000489927 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
PLOD3-216ENST00000489927 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
PLOD3-216ENST00000489927 CBY1Q9Y3M2 126 aa8.57□□□□□ -1.04
PLOD3-216ENST00000489927 TRGC2P03986 189 aa8.56□□□□□ -1.04
PLOD3-216ENST00000489927 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
PLOD3-216ENST00000489927 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
PLOD3-216ENST00000489927 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
PLOD3-216ENST00000489927 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
PLOD3-216ENST00000489927 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
PLOD3-216ENST00000489927 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
PLOD3-216ENST00000489927 E9PLD3 99 aa8.53□□□□□ -1.04
PLOD3-216ENST00000489927 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
PLOD3-216ENST00000489927 LITAFQ99732 161 aa8.52□□□□□ -1.05
PLOD3-216ENST00000489927 H7C2G1 150 aa8.51□□□□□ -1.05
PLOD3-216ENST00000489927 CD164Q04900 197 aa8.51□□□□□ -1.05
PLOD3-216ENST00000489927 Q1RN00 199 aa8.51□□□□□ -1.05
PLOD3-216ENST00000489927 ELOF1P60002 83 aaKnown RBP8.5□□□□□ -1.05
PLOD3-216ENST00000489927 COX7BP24311 80 aa8.49□□□□□ -1.05
PLOD3-216ENST00000489927 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
PLOD3-216ENST00000489927 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
PLOD3-216ENST00000489927 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
PLOD3-216ENST00000489927 M0R2T5 61 aa8.48□□□□□ -1.05
PLOD3-216ENST00000489927 TAL2Q16559 108 aa8.48□□□□□ -1.05
PLOD3-216ENST00000489927 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
PLOD3-216ENST00000489927 SLC7A5P1Q8MH63 180 aa8.48□□□□□ -1.05
PLOD3-216ENST00000489927 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
PLOD3-216ENST00000489927 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.06
PLOD3-216ENST00000489927 TIMM17BO60830 172 aa8.46□□□□□ -1.06
PLOD3-216ENST00000489927 RPL37P61927 97 aaKnown RBP8.46□□□□□ -1.06
PLOD3-216ENST00000489927 C1orf195Q5TG92 126 aa8.46□□□□□ -1.06
PLOD3-216ENST00000489927 Q5XG85 94 aa8.46□□□□□ -1.06
PLOD3-216ENST00000489927 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
PLOD3-216ENST00000489927 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
PLOD3-216ENST00000489927 AKR1D1P51857 326 aa8.44□□□□□ -1.06
PLOD3-216ENST00000489927 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
PLOD3-216ENST00000489927 LINC00518Q8N0U6 118 aa8.43□□□□□ -1.06
PLOD3-216ENST00000489927 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
PLOD3-216ENST00000489927 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
PLOD3-216ENST00000489927 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
PLOD3-216ENST00000489927 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
PLOD3-216ENST00000489927 IGLV5-48A0A075B6I7 105 aa8.39□□□□□ -1.07
PLOD3-216ENST00000489927 COLCA2A8K830 154 aa8.38□□□□□ -1.07
PLOD3-216ENST00000489927 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
PLOD3-216ENST00000489927 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
PLOD3-216ENST00000489927 A6NDN8 102 aa8.34□□□□□ -1.07
PLOD3-216ENST00000489927 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
PLOD3-216ENST00000489927 TCL1BO95988 128 aa8.33□□□□□ -1.08
PLOD3-216ENST00000489927 SCGB1D4Q6XE38 83 aa8.32□□□□□ -1.08
PLOD3-216ENST00000489927 A4D1N5 150 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
PLOD3-216ENST00000489927 IFITM1P13164 125 aa8.29□□□□□ -1.08
PLOD3-216ENST00000489927 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
PLOD3-216ENST00000489927 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
PLOD3-216ENST00000489927 C3orf79P0CE67 100 aa8.28□□□□□ -1.08
PLOD3-216ENST00000489927 Q6Q795 121 aa8.27□□□□□ -1.09
PLOD3-216ENST00000489927 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
PLOD3-216ENST00000489927 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
PLOD3-216ENST00000489927 USH2AO75445 5202 aa8.26□□□□□ -1.09
PLOD3-216ENST00000489927 F8WEM9 126 aa8.25□□□□□ -1.09
PLOD3-216ENST00000489927 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
PLOD3-216ENST00000489927 Q6ZVH6 145 aa8.25□□□□□ -1.09
PLOD3-216ENST00000489927 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
PLOD3-216ENST00000489927 KRTDAPP60985 99 aa8.24□□□□□ -1.09
PLOD3-216ENST00000489927 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms