RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 KRTAP4-16G5E9R7 235 aaPredicted RBP4.72□□□□□ -1.65
HUWE1-213ENST00000489876 J3QQQ9 107 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 ERC2-IT1O76042 136 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 DPM2O94777 84 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 RPL24P83731 157 aaKnown RBP4.72□□□□□ -1.65
HUWE1-213ENST00000489876 PRR4Q16378 134 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 HIGD2AQ9BW72 106 aa4.72□□□□□ -1.65
HUWE1-213ENST00000489876 IGKV2D-26A0A0A0MRZ7 120 aa4.71□□□□□ -1.66
HUWE1-213ENST00000489876 MYMXA0A1B0GTQ4 84 aa4.71□□□□□ -1.66
HUWE1-213ENST00000489876 IGKCP01834 107 aa4.71□□□□□ -1.66
HUWE1-213ENST00000489876 CRYGAP11844 174 aa4.71□□□□□ -1.66
HUWE1-213ENST00000489876 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
HUWE1-213ENST00000489876 SPRR1AP35321 89 aa4.7□□□□□ -1.66
HUWE1-213ENST00000489876 RPL13AP40429 203 aaKnown RBP4.7□□□□□ -1.66
HUWE1-213ENST00000489876 PPDPFQ9H3Y8 114 aa4.7□□□□□ -1.66
HUWE1-213ENST00000489876 A0A0J9YXY3 114 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 SYS1-DBNDD2H3BUS1 97 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 C3orf79P0CE67 100 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 PLNP26678 52 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 HERV-K104P63124 156 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 SMCR5Q8TEV8 140 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 SPRR4Q96PI1 79 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 LITAFQ99732 161 aa4.69□□□□□ -1.66
HUWE1-213ENST00000489876 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
HUWE1-213ENST00000489876 LINC01545Q5VT33 79 aa4.68□□□□□ -1.66
HUWE1-213ENST00000489876 SFTA2Q6UW10 78 aa4.68□□□□□ -1.66
HUWE1-213ENST00000489876 Q9BRP9 147 aa4.68□□□□□ -1.66
HUWE1-213ENST00000489876 MAP1LC3CQ9BXW4 147 aa4.68□□□□□ -1.66
HUWE1-213ENST00000489876 KCNQ1DNQ9H478 68 aa4.68□□□□□ -1.66
HUWE1-213ENST00000489876 LOC107984156A0A0G2JMH3 177 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 E9PLD3 99 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 PRYO14603 147 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 FAM229BQ4G0N7 80 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 LINC00304Q8N9R0 145 aa4.67□□□□□ -1.66
HUWE1-213ENST00000489876 HERVK_113P61574 105 aa4.66□□□□□ -1.66
HUWE1-213ENST00000489876 ATOH7Q8N100 152 aa4.66□□□□□ -1.66
HUWE1-213ENST00000489876 DDTP30046 118 aa4.65□□□□□ -1.67
HUWE1-213ENST00000489876 KRTDAPP60985 99 aa4.65□□□□□ -1.67
HUWE1-213ENST00000489876 COA6Q5JTJ3 125 aaKnown RBP4.65□□□□□ -1.67
HUWE1-213ENST00000489876 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
HUWE1-213ENST00000489876 ST20-AS1Q8NBB2 130 aa4.65□□□□□ -1.67
HUWE1-213ENST00000489876 ETDCA0A1B0GVM5 59 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 NMUP48645 174 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 GAGE2AQ6NT46 116 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 PET117Q6UWS5 81 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 LINC00308Q8TCZ7 52 aa4.64□□□□□ -1.67
HUWE1-213ENST00000489876 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
HUWE1-213ENST00000489876 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
HUWE1-213ENST00000489876 Q8NBF4 154 aa4.63□□□□□ -1.67
HUWE1-213ENST00000489876 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
HUWE1-213ENST00000489876 PCP2Q8IVA1 136 aa4.62□□□□□ -1.67
HUWE1-213ENST00000489876 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 LINC00587B1AMM8 73 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 NDUFC2O95298 119 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 MOBPQ13875 183 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 Q6ZRX8 168 aa4.61□□□□□ -1.67
HUWE1-213ENST00000489876 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
HUWE1-213ENST00000489876 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
HUWE1-213ENST00000489876 MIEN1Q9BRT3 115 aa4.6□□□□□ -1.67
HUWE1-213ENST00000489876 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
HUWE1-213ENST00000489876 ZNF73O43830 326 aaPredicted RBP4.59□□□□□ -1.67
HUWE1-213ENST00000489876 TIMM17BO60830 172 aa4.59□□□□□ -1.67
HUWE1-213ENST00000489876 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.67
HUWE1-213ENST00000489876 OR13C6PQ8NH95 151 aa4.58□□□□□ -1.68
HUWE1-213ENST00000489876 HIST1H2BLQ99880 126 aa4.58□□□□□ -1.68
HUWE1-213ENST00000489876 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
HUWE1-213ENST00000489876 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
HUWE1-213ENST00000489876 SPANXCQ9NY87 97 aa4.57□□□□□ -1.68
HUWE1-213ENST00000489876 MUC2Q02817 5179 aa4.57□□□□□ -1.68
HUWE1-213ENST00000489876 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
HUWE1-213ENST00000489876 SPANXDQ9BXN6 97 aa4.56□□□□□ -1.68
HUWE1-213ENST00000489876 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
HUWE1-213ENST00000489876 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
HUWE1-213ENST00000489876 C6orf99Q4VX62 202 aa4.55□□□□□ -1.68
HUWE1-213ENST00000489876 Q8N377 158 aa4.55□□□□□ -1.68
HUWE1-213ENST00000489876 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
HUWE1-213ENST00000489876 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
HUWE1-213ENST00000489876 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
HUWE1-213ENST00000489876 SCGB1D4Q6XE38 83 aa4.54□□□□□ -1.68
HUWE1-213ENST00000489876 COX7BP24311 80 aa4.53□□□□□ -1.68
HUWE1-213ENST00000489876 LINC01547P58512 204 aaPredicted RBP4.53□□□□□ -1.68
HUWE1-213ENST00000489876 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
HUWE1-213ENST00000489876 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
HUWE1-213ENST00000489876 SPAG11AQ6PDA7 123 aa4.53□□□□□ -1.68
HUWE1-213ENST00000489876 DEFB105AQ8NG35 78 aa4.53□□□□□ -1.68
HUWE1-213ENST00000489876 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
HUWE1-213ENST00000489876 C20orf202A1L168 122 aa4.52□□□□□ -1.69
HUWE1-213ENST00000489876 SPRR1BP22528 89 aa4.52□□□□□ -1.69
HUWE1-213ENST00000489876 S100A12P80511 92 aa4.52□□□□□ -1.69
HUWE1-213ENST00000489876 Q1RN00 199 aa4.52□□□□□ -1.69
HUWE1-213ENST00000489876 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
HUWE1-213ENST00000489876 SMIM29Q86T20 159 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms