RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HERVK_113P61574 105 aa10.21□□□□□ -0.77
HDAC6-231ENST00000488905 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
HDAC6-231ENST00000488905 SERF1AO75920 110 aa10.19□□□□□ -0.78
HDAC6-231ENST00000488905 DPM2O94777 84 aa10.19□□□□□ -0.78
HDAC6-231ENST00000488905 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-231ENST00000488905 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
HDAC6-231ENST00000488905 IGKCP01834 107 aa10.17□□□□□ -0.78
HDAC6-231ENST00000488905 TRGC2P03986 189 aa10.17□□□□□ -0.78
HDAC6-231ENST00000488905 NPC2P61916 151 aa10.17□□□□□ -0.78
HDAC6-231ENST00000488905 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
HDAC6-231ENST00000488905 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
HDAC6-231ENST00000488905 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
HDAC6-231ENST00000488905 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-231ENST00000488905 FABP4P15090 132 aa10.14□□□□□ -0.79
HDAC6-231ENST00000488905 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
HDAC6-231ENST00000488905 C5orf52A6NGY3 159 aa10.13□□□□□ -0.79
HDAC6-231ENST00000488905 ADAMTSL4-AS1Q5T5F5 129 aa10.13□□□□□ -0.79
HDAC6-231ENST00000488905 CBY1Q9Y3M2 126 aa10.11□□□□□ -0.79
HDAC6-231ENST00000488905 HINT1P49773 126 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-231ENST00000488905 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
HDAC6-231ENST00000488905 E9PLD3 99 aa10.09□□□□□ -0.79
HDAC6-231ENST00000488905 SPRR1BP22528 89 aa10.09□□□□□ -0.79
HDAC6-231ENST00000488905 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
HDAC6-231ENST00000488905 SPANXCQ9NY87 97 aa10.08□□□□□ -0.8
HDAC6-231ENST00000488905 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
HDAC6-231ENST00000488905 KRTAP19-2Q3LHN2 52 aa10.06□□□□□ -0.8
HDAC6-231ENST00000488905 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
HDAC6-231ENST00000488905 DHRS4-AS1Q9P1J3 65 aa10.06□□□□□ -0.8
HDAC6-231ENST00000488905 FSIP2Q5CZC0 6907 aa10.06□□□□□ -0.8
HDAC6-231ENST00000488905 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
HDAC6-231ENST00000488905 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
HDAC6-231ENST00000488905 LITAFQ99732 161 aa10.05□□□□□ -0.8
HDAC6-231ENST00000488905 C9orf92A6NGG3 77 aa10.03□□□□□ -0.8
HDAC6-231ENST00000488905 PCOTHQ58A44 107 aa10.03□□□□□ -0.8
HDAC6-231ENST00000488905 LAMTOR3Q9UHA4 124 aa10.03□□□□□ -0.8
HDAC6-231ENST00000488905 SPANXDQ9BXN6 97 aa10.02□□□□□ -0.81
HDAC6-231ENST00000488905 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
HDAC6-231ENST00000488905 TIMM17BO60830 172 aa10.01□□□□□ -0.81
HDAC6-231ENST00000488905 CRCT1Q9UGL9 99 aa10.01□□□□□ -0.81
HDAC6-231ENST00000488905 ELOF1P60002 83 aaKnown RBP10□□□□□ -0.81
HDAC6-231ENST00000488905 MT1HP80294 61 aa10□□□□□ -0.81
HDAC6-231ENST00000488905 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
HDAC6-231ENST00000488905 COX7BP24311 80 aa9.98□□□□□ -0.81
HDAC6-231ENST00000488905 CD164Q04900 197 aa9.97□□□□□ -0.81
HDAC6-231ENST00000488905 Q1RN00 199 aa9.97□□□□□ -0.81
HDAC6-231ENST00000488905 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
HDAC6-231ENST00000488905 ZNF815PA8K554 130 aa9.96□□□□□ -0.82
HDAC6-231ENST00000488905 COLCA2A8K830 154 aa9.96□□□□□ -0.82
HDAC6-231ENST00000488905 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
HDAC6-231ENST00000488905 TAL2Q16559 108 aa9.95□□□□□ -0.82
HDAC6-231ENST00000488905 SLC7A5P1Q8MH63 180 aa9.95□□□□□ -0.82
HDAC6-231ENST00000488905 PRO1933Q9H354 126 aa9.95□□□□□ -0.82
HDAC6-231ENST00000488905 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
HDAC6-231ENST00000488905 LINC00518Q8N0U6 118 aa9.94□□□□□ -0.82
HDAC6-231ENST00000488905 DEFB105AQ8NG35 78 aa9.94□□□□□ -0.82
HDAC6-231ENST00000488905 TTTY13Q9BZ97 58 aa9.94□□□□□ -0.82
HDAC6-231ENST00000488905 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
HDAC6-231ENST00000488905 FLGP20930 4061 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-231ENST00000488905 H7C2G1 150 aa9.92□□□□□ -0.82
HDAC6-231ENST00000488905 Q5XG85 94 aa9.91□□□□□ -0.82
HDAC6-231ENST00000488905 TRBV7-6A0A0J9YX20 115 aa9.9□□□□□ -0.82
HDAC6-231ENST00000488905 PET117Q6UWS5 81 aa9.9□□□□□ -0.82
HDAC6-231ENST00000488905 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-231ENST00000488905 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
HDAC6-231ENST00000488905 A0A1B0GWB2 263 aa9.88□□□□□ -0.83
HDAC6-231ENST00000488905 AKR1D1P51857 326 aa9.88□□□□□ -0.83
HDAC6-231ENST00000488905 C1orf195Q5TG92 126 aa9.88□□□□□ -0.83
HDAC6-231ENST00000488905 IGLV5-48A0A075B6I7 105 aa9.87□□□□□ -0.83
HDAC6-231ENST00000488905 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-231ENST00000488905 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-231ENST00000488905 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
HDAC6-231ENST00000488905 SCGB1D4Q6XE38 83 aa9.85□□□□□ -0.83
HDAC6-231ENST00000488905 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
HDAC6-231ENST00000488905 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
HDAC6-231ENST00000488905 C3orf79P0CE67 100 aa9.83□□□□□ -0.84
HDAC6-231ENST00000488905 A6NDN8 102 aa9.82□□□□□ -0.84
HDAC6-231ENST00000488905 IFITM1P13164 125 aa9.81□□□□□ -0.84
HDAC6-231ENST00000488905 A4D1N5 150 aa9.79□□□□□ -0.84
HDAC6-231ENST00000488905 M0R2T5 61 aa9.78□□□□□ -0.84
HDAC6-231ENST00000488905 KRTDAPP60985 99 aa9.78□□□□□ -0.84
HDAC6-231ENST00000488905 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
HDAC6-231ENST00000488905 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
HDAC6-231ENST00000488905 Q6ZVH6 145 aa9.78□□□□□ -0.84
HDAC6-231ENST00000488905 NHP2Q9NX24 153 aaKnown RBP9.78□□□□□ -0.84
HDAC6-231ENST00000488905 TCL1BO95988 128 aa9.76□□□□□ -0.85
HDAC6-231ENST00000488905 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
HDAC6-231ENST00000488905 C20orf202A1L168 122 aa9.75□□□□□ -0.85
HDAC6-231ENST00000488905 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
HDAC6-231ENST00000488905 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
HDAC6-231ENST00000488905 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms