RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 DLEU1O43261 78 aa11.09□□□□□ -0.63
PTCD3-217ENST00000488801 B5MCH6 92 aa11.08□□□□□ -0.64
PTCD3-217ENST00000488801 S100A12P80511 92 aa11.08□□□□□ -0.64
PTCD3-217ENST00000488801 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
PTCD3-217ENST00000488801 LINC00518Q8N0U6 118 aa11.08□□□□□ -0.64
PTCD3-217ENST00000488801 A0A087X002 238 aa11.07□□□□□ -0.64
PTCD3-217ENST00000488801 ETDCA0A1B0GVM5 59 aa11.07□□□□□ -0.64
PTCD3-217ENST00000488801 PYY3Q5JQD4 70 aa11.07□□□□□ -0.64
PTCD3-217ENST00000488801 Q6ZRX8 168 aa11.07□□□□□ -0.64
PTCD3-217ENST00000488801 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
PTCD3-217ENST00000488801 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
PTCD3-217ENST00000488801 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
PTCD3-217ENST00000488801 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
PTCD3-217ENST00000488801 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
PTCD3-217ENST00000488801 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
PTCD3-217ENST00000488801 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
PTCD3-217ENST00000488801 Q9BRP9 147 aa11.04□□□□□ -0.64
PTCD3-217ENST00000488801 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
PTCD3-217ENST00000488801 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
PTCD3-217ENST00000488801 HMCN2Q8NDA2 5059 aa11.04□□□□□ -0.64
PTCD3-217ENST00000488801 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
PTCD3-217ENST00000488801 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
PTCD3-217ENST00000488801 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
PTCD3-217ENST00000488801 CRYGAP11844 174 aa11□□□□□ -0.65
PTCD3-217ENST00000488801 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
PTCD3-217ENST00000488801 C14orf144Q96I85 54 aa11□□□□□ -0.65
PTCD3-217ENST00000488801 HIGD1BQ9P298 99 aa11□□□□□ -0.65
PTCD3-217ENST00000488801 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
PTCD3-217ENST00000488801 C2orf91Q6ZV80 131 aa10.99□□□□□ -0.65
PTCD3-217ENST00000488801 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
PTCD3-217ENST00000488801 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
PTCD3-217ENST00000488801 SLC25A34Q6PIV7 304 aa10.97□□□□□ -0.65
PTCD3-217ENST00000488801 A4D1N5 150 aa10.96□□□□□ -0.65
PTCD3-217ENST00000488801 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.65
PTCD3-217ENST00000488801 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
PTCD3-217ENST00000488801 TRBV7-6A0A0J9YX20 115 aa10.94□□□□□ -0.66
PTCD3-217ENST00000488801 C6orf99Q4VX62 202 aa10.94□□□□□ -0.66
PTCD3-217ENST00000488801 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
PTCD3-217ENST00000488801 A6NDN8 102 aa10.92□□□□□ -0.66
PTCD3-217ENST00000488801 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
PTCD3-217ENST00000488801 HINT1P49773 126 aaPredicted RBP10.91□□□□□ -0.66
PTCD3-217ENST00000488801 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
PTCD3-217ENST00000488801 COX7BP24311 80 aa10.9□□□□□ -0.66
PTCD3-217ENST00000488801 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
PTCD3-217ENST00000488801 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
PTCD3-217ENST00000488801 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
PTCD3-217ENST00000488801 TAL2Q16559 108 aa10.88□□□□□ -0.67
PTCD3-217ENST00000488801 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
PTCD3-217ENST00000488801 SPRR1BP22528 89 aa10.85□□□□□ -0.67
PTCD3-217ENST00000488801 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
PTCD3-217ENST00000488801 CFC1BP0CG36 223 aa10.84□□□□□ -0.67
PTCD3-217ENST00000488801 CFC1P0CG37 223 aa10.84□□□□□ -0.67
PTCD3-217ENST00000488801 C12orf57Q99622 126 aa10.84□□□□□ -0.67
PTCD3-217ENST00000488801 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
PTCD3-217ENST00000488801 CEND1Q8N111 149 aa10.83□□□□□ -0.68
PTCD3-217ENST00000488801 LINC00304Q8N9R0 145 aa10.83□□□□□ -0.68
PTCD3-217ENST00000488801 CTAG1AP78358 180 aa10.81□□□□□ -0.68
PTCD3-217ENST00000488801 FXYD2P54710 66 aa10.8□□□□□ -0.68
PTCD3-217ENST00000488801 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
PTCD3-217ENST00000488801 LINC01547P58512 204 aaPredicted RBP10.79□□□□□ -0.68
PTCD3-217ENST00000488801 IGLV5-48A0A075B6I7 105 aa10.78□□□□□ -0.68
PTCD3-217ENST00000488801 HSD52Q0P140 79 aa10.78□□□□□ -0.68
PTCD3-217ENST00000488801 LRP2P98164 4655 aa10.77□□□□□ -0.68
PTCD3-217ENST00000488801 SMIM6P0DI80 62 aa10.77□□□□□ -0.69
PTCD3-217ENST00000488801 Q8NBF4 154 aa10.76□□□□□ -0.69
PTCD3-217ENST00000488801 TMEM238LA0A1B0GVL6 79 aa10.75□□□□□ -0.69
PTCD3-217ENST00000488801 A6NJY4 79 aa10.75□□□□□ -0.69
PTCD3-217ENST00000488801 MOBPQ13875 183 aa10.75□□□□□ -0.69
PTCD3-217ENST00000488801 LINC00575Q6W349 94 aa10.75□□□□□ -0.69
PTCD3-217ENST00000488801 NHP2Q9NX24 153 aaKnown RBP10.75□□□□□ -0.69
PTCD3-217ENST00000488801 IGLV9-49A0A0B4J1Y8 123 aa10.74□□□□□ -0.69
PTCD3-217ENST00000488801 TSPAN13O95857 204 aa10.74□□□□□ -0.69
PTCD3-217ENST00000488801 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
PTCD3-217ENST00000488801 RAB37Q96AX2 223 aa10.74□□□□□ -0.69
PTCD3-217ENST00000488801 VAMP3Q15836 100 aa10.73□□□□□ -0.69
PTCD3-217ENST00000488801 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
PTCD3-217ENST00000488801 SPAG11AQ6PDA7 123 aa10.73□□□□□ -0.69
PTCD3-217ENST00000488801 TEX49A0A1B0GTD5 131 aa10.72□□□□□ -0.69
PTCD3-217ENST00000488801 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
PTCD3-217ENST00000488801 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
PTCD3-217ENST00000488801 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
PTCD3-217ENST00000488801 LPAP08519 4548 aa10.7□□□□□ -0.7
PTCD3-217ENST00000488801 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 H7C2G1 150 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 SLC25A20O43772 301 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
PTCD3-217ENST00000488801 Q8N377 158 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 UBR4Q5T4S7 5183 aa10.68□□□□□ -0.7
PTCD3-217ENST00000488801 C9orf153Q5TBE3 101 aa10.67□□□□□ -0.7
PTCD3-217ENST00000488801 SPINK1P00995 79 aa10.66□□□□□ -0.7
PTCD3-217ENST00000488801 Q6ZQY7 126 aa10.66□□□□□ -0.7
PTCD3-217ENST00000488801 DEFB105AQ8NG35 78 aa10.66□□□□□ -0.7
PTCD3-217ENST00000488801 PRO1933Q9H354 126 aa10.66□□□□□ -0.7
PTCD3-217ENST00000488801 Q1RN00 199 aa10.65□□□□□ -0.7
PTCD3-217ENST00000488801 K7ERJ3 54 aa10.64□□□□□ -0.71
PTCD3-217ENST00000488801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
PTCD3-217ENST00000488801 H0YGX0 51 aa10.63□□□□□ -0.71
PTCD3-217ENST00000488801 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
PTCD3-217ENST00000488801 FAM218AQ96MZ4 157 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms