RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
HDAC6-230ENST00000488543 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
HDAC6-230ENST00000488543 LY6G6CO95867 125 aa7.93□□□□□ -1.14
HDAC6-230ENST00000488543 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
HDAC6-230ENST00000488543 SYCNQ0VAF6 134 aa7.93□□□□□ -1.14
HDAC6-230ENST00000488543 TMEM126AQ9H061 195 aa7.93□□□□□ -1.14
HDAC6-230ENST00000488543 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
HDAC6-230ENST00000488543 CCKP06307 115 aa7.92□□□□□ -1.14
HDAC6-230ENST00000488543 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
HDAC6-230ENST00000488543 HYDINQ4G0P3 5121 aa7.91□□□□□ -1.14
HDAC6-230ENST00000488543 NDUFC2-KCTD14E9PQ53 114 aa7.91□□□□□ -1.14
HDAC6-230ENST00000488543 Q6JHZ5 121 aa7.91□□□□□ -1.14
HDAC6-230ENST00000488543 A0A1B0GX51 115 aa7.9□□□□□ -1.14
HDAC6-230ENST00000488543 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
HDAC6-230ENST00000488543 FAM19A1Q7Z5A9 133 aa7.9□□□□□ -1.15
HDAC6-230ENST00000488543 C3orf84H3BNL1 204 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 UQCRQO14949 82 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 Q6ZRP5 223 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 OXTP01178 125 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 LINC00575Q6W349 94 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
HDAC6-230ENST00000488543 COX7CP15954 63 aa7.88□□□□□ -1.15
HDAC6-230ENST00000488543 LINC00476Q8WZB0 136 aa7.88□□□□□ -1.15
HDAC6-230ENST00000488543 TRBV10-3A0A0K0K1G6 114 aa7.88□□□□□ -1.15
HDAC6-230ENST00000488543 PSCAO43653 123 aa7.88□□□□□ -1.15
HDAC6-230ENST00000488543 TMEM256-PLSCR3K7ERE1 68 aa7.87□□□□□ -1.15
HDAC6-230ENST00000488543 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
HDAC6-230ENST00000488543 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
HDAC6-230ENST00000488543 Q6ZQY7 126 aa7.87□□□□□ -1.15
HDAC6-230ENST00000488543 LAMTOR3Q9UHA4 124 aa7.87□□□□□ -1.15
HDAC6-230ENST00000488543 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
HDAC6-230ENST00000488543 LOC107984640A0A0U1RRK4 108 aa7.86□□□□□ -1.15
HDAC6-230ENST00000488543 ATOX1O00244 68 aa7.86□□□□□ -1.15
HDAC6-230ENST00000488543 Q6ZR54 194 aa7.86□□□□□ -1.15
HDAC6-230ENST00000488543 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-230ENST00000488543 JMJD7-PLA2G4BH0Y9G9 81 aa7.85□□□□□ -1.15
HDAC6-230ENST00000488543 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
HDAC6-230ENST00000488543 Q6ZQT0 140 aa7.83□□□□□ -1.16
HDAC6-230ENST00000488543 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
HDAC6-230ENST00000488543 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
HDAC6-230ENST00000488543 RBM3P98179 157 aaKnown RBP7.82□□□□□ -1.16
HDAC6-230ENST00000488543 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-230ENST00000488543 M0R378 163 aa7.81□□□□□ -1.16
HDAC6-230ENST00000488543 SCXQ7RTU7 201 aa7.81□□□□□ -1.16
HDAC6-230ENST00000488543 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
HDAC6-230ENST00000488543 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
HDAC6-230ENST00000488543 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
HDAC6-230ENST00000488543 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC6-230ENST00000488543 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
HDAC6-230ENST00000488543 PRYO14603 147 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 CRYGAP11844 174 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 HAMPP81172 84 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 UBL5Q9BZL1 73 aa7.79□□□□□ -1.16
HDAC6-230ENST00000488543 ZNF73O43830 326 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-230ENST00000488543 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
HDAC6-230ENST00000488543 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
HDAC6-230ENST00000488543 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
HDAC6-230ENST00000488543 C14orf177Q52M58 125 aa7.77□□□□□ -1.17
HDAC6-230ENST00000488543 KMT2CQ8NEZ4 4911 aaKnown RBP7.77□□□□□ -1.17
HDAC6-230ENST00000488543 DNAH6Q9C0G6 4158 aa7.77□□□□□ -1.17
HDAC6-230ENST00000488543 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
HDAC6-230ENST00000488543 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
HDAC6-230ENST00000488543 COX7BP24311 80 aa7.76□□□□□ -1.17
HDAC6-230ENST00000488543 Q6ZVQ6 151 aa7.76□□□□□ -1.17
HDAC6-230ENST00000488543 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
HDAC6-230ENST00000488543 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
HDAC6-230ENST00000488543 A0A087WTM6 91 aa7.75□□□□□ -1.17
HDAC6-230ENST00000488543 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-230ENST00000488543 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
HDAC6-230ENST00000488543 LOC110117498A0A087WWA1 95 aa7.74□□□□□ -1.17
HDAC6-230ENST00000488543 A0A096LNI7 61 aa7.74□□□□□ -1.17
HDAC6-230ENST00000488543 DNAH17Q9UFH2 4485 aa7.74□□□□□ -1.17
HDAC6-230ENST00000488543 RTL8CO15255 209 aa7.73□□□□□ -1.17
HDAC6-230ENST00000488543 ELOF1P60002 83 aaKnown RBP7.73□□□□□ -1.17
HDAC6-230ENST00000488543 TRBV7-6A0A0J9YX20 115 aa7.73□□□□□ -1.17
HDAC6-230ENST00000488543 C16orf90A8MZG2 172 aa7.73□□□□□ -1.17
HDAC6-230ENST00000488543 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
HDAC6-230ENST00000488543 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
HDAC6-230ENST00000488543 ATP5EP2Q5VTU8 51 aa7.72□□□□□ -1.17
HDAC6-230ENST00000488543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-230ENST00000488543 FAM19A5Q7Z5A7 132 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-230ENST00000488543 Q8N9L7 120 aa7.71□□□□□ -1.17
HDAC6-230ENST00000488543 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.17
HDAC6-230ENST00000488543 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.17
HDAC6-230ENST00000488543 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
HDAC6-230ENST00000488543 LCE6AA0A183 80 aa7.7□□□□□ -1.18
HDAC6-230ENST00000488543 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
HDAC6-230ENST00000488543 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
HDAC6-230ENST00000488543 IGKV2-24A0A0C4DH68 120 aa7.7□□□□□ -1.18
HDAC6-230ENST00000488543 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
HDAC6-230ENST00000488543 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
HDAC6-230ENST00000488543 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
HDAC6-230ENST00000488543 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
HDAC6-230ENST00000488543 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
HDAC6-230ENST00000488543 J3KT08 172 aa7.69□□□□□ -1.18
HDAC6-230ENST00000488543 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
HDAC6-230ENST00000488543 CHTF8P0CG12 524 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms