RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TRAV12-1A0A0B4J245 112 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 SMKR1H3BMG3 65 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 SRP19P09132 144 aaKnown RBP1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 CKS2P33552 79 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 MT1HP80294 61 aa1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 FAM19A5Q7Z5A7 132 aaPredicted RBP1.5□□□□□ -2.17
DEPDC1-203ENST00000488146 FAM168BA1KXE4 195 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 ARPC5O15511 151 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 AKR1D1P51857 326 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 BAGE3Q86Y29 109 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP11-1Q8IUC1 163 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 PLEKHB2Q96CS7 222 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 TIMM17BO60830 172 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 HSBP1O75506 76 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 DSCR10P59022 87 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 FABP9Q0Z7S8 132 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 PMVKQ15126 192 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 PRELID3AQ96N28 172 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 SMIM7Q9BQ49 75 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
DEPDC1-203ENST00000488146 RAB5BP61020 215 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 C5orf38Q86SI9 138 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 COPS9Q8WXC6 57 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 ZNF625Q96I27 306 aaPredicted RBP1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 HIST1H4GQ99525 98 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 SPANXB1Q9NS25 103 aaPredicted RBP1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 SMIM26A0A096LP01 95 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 TRAV13-1A0A0B4J241 112 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 SNAPINO95295 136 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 RPL23P62829 140 aaKnown RBP1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 ERG28Q9UKR5 140 aa1.48□□□□□ -2.17
DEPDC1-203ENST00000488146 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 TMEM136Q6ZRR5 245 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP2-2Q9BYT5 123 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 C11orf86A6NJI1 115 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 D6R8Y8 96 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 NPYP01303 97 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 MT-ND4LP03901 98 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 PFN2P35080 140 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 Q6Q795 121 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 CST9LQ9H4G1 147 aa1.47□□□□□ -2.17
DEPDC1-203ENST00000488146 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.17
DEPDC1-203ENST00000488146 IGLV6-57P01721 117 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 Q6ZRX8 168 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 AKAP14Q86UN6 197 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 COMMD7Q86VX2 200 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 SND1-IT1Q9HBX3 110 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 V9GYY9 64 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 H3BQ85 93 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 Q6JHZ5 121 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 FAM19A1Q7Z5A9 133 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 BOD1L2Q8IYS8 172 aa1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 NHP2Q9NX24 153 aaKnown RBP1.46□□□□□ -2.18
DEPDC1-203ENST00000488146 IGLV5-48A0A075B6I7 105 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 CHCHD1Q96BP2 118 aaKnown RBP1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 PRO1933Q9H354 126 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 IGKV3OR2-268A0A0C4DH90 116 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 MYMXA0A1B0GTQ4 84 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 SERF1AO75920 110 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 TCL1BO95988 128 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 LINC01545Q5VT33 79 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 LINC00469Q8N7U9 141 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 SMCR5Q8TEV8 140 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 SPANXDQ9BXN6 97 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 SEC11CQ9BY50 192 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 CDKN2A-AS1Q9UH64 79 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 LAMTOR3Q9UHA4 124 aa1.45□□□□□ -2.18
DEPDC1-203ENST00000488146 TMEM223A0PJW6 202 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 ZNF22P17026 224 aaPredicted RBP1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 RPL39P62891 51 aaKnown RBP1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 TAL2Q16559 108 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 HSBP1L1C9JCN9 74 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 C9JQL5 133 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 C3orf22Q8N5N4 141 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 C20orf166-AS1Q96NR2 134 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
DEPDC1-203ENST00000488146 C20orf202A1L168 122 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 LEPROTO15243 131 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 HBDP02042 147 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 HINT1P49773 126 aaPredicted RBP1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 SOSTDC1Q6X4U4 206 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 H7C2G1 150 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 PLNP26678 52 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 RHEBQ15382 184 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 LCE1EQ5T753 118 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 C2orf82Q6UX34 121 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 MUC21A0A140T8X8 626 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 A8MUU9 505 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 IFITM1P13164 125 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 S100PP25815 95 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 HERVK_113P61574 105 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 OCIAD2Q56VL3 154 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 SS18L2Q9UHA2 77 aa1.43□□□□□ -2.18
DEPDC1-203ENST00000488146 TEX49A0A1B0GTD5 131 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 283 ms