RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 B5MCH6 92 aa13.91□□□□□ -0.18
RHBDD3-205ENST00000488106 PCP2Q8IVA1 136 aa13.91□□□□□ -0.18
RHBDD3-205ENST00000488106 SPRR4Q96PI1 79 aa13.91□□□□□ -0.18
RHBDD3-205ENST00000488106 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.18
RHBDD3-205ENST00000488106 ZNF706Q9Y5V0 76 aaPredicted RBP13.9□□□□□ -0.18
RHBDD3-205ENST00000488106 TSPAN13O95857 204 aa13.89□□□□□ -0.19
RHBDD3-205ENST00000488106 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
RHBDD3-205ENST00000488106 OR13C6PQ8NH95 151 aa13.87□□□□□ -0.19
RHBDD3-205ENST00000488106 SPANXDQ9BXN6 97 aa13.87□□□□□ -0.19
RHBDD3-205ENST00000488106 Q6ZRX8 168 aa13.86□□□□□ -0.19
RHBDD3-205ENST00000488106 C3orf22Q8N5N4 141 aa13.86□□□□□ -0.19
RHBDD3-205ENST00000488106 ZNF73O43830 326 aaPredicted RBP13.85□□□□□ -0.19
RHBDD3-205ENST00000488106 PPDPFQ9H3Y8 114 aa13.85□□□□□ -0.19
RHBDD3-205ENST00000488106 Q9BRP9 147 aa13.84□□□□□ -0.19
RHBDD3-205ENST00000488106 HSBP1L1C9JCN9 74 aa13.83□□□□□ -0.2
RHBDD3-205ENST00000488106 ERC2-IT1O76042 136 aa13.83□□□□□ -0.2
RHBDD3-205ENST00000488106 LINC00304Q8N9R0 145 aa13.83□□□□□ -0.2
RHBDD3-205ENST00000488106 LPAP08519 4548 aa13.83□□□□□ -0.2
RHBDD3-205ENST00000488106 CBY1Q9Y3M2 126 aa13.81□□□□□ -0.2
RHBDD3-205ENST00000488106 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
RHBDD3-205ENST00000488106 C5orf52A6NGY3 159 aa13.79□□□□□ -0.2
RHBDD3-205ENST00000488106 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
RHBDD3-205ENST00000488106 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
RHBDD3-205ENST00000488106 PRR4Q16378 134 aa13.79□□□□□ -0.2
RHBDD3-205ENST00000488106 GAGE2AQ6NT46 116 aa13.79□□□□□ -0.2
RHBDD3-205ENST00000488106 LINC00518Q8N0U6 118 aa13.78□□□□□ -0.2
RHBDD3-205ENST00000488106 IFITM1P13164 125 aa13.77□□□□□ -0.21
RHBDD3-205ENST00000488106 Q6ZVH6 145 aa13.77□□□□□ -0.21
RHBDD3-205ENST00000488106 HINT1P49773 126 aaPredicted RBP13.76□□□□□ -0.21
RHBDD3-205ENST00000488106 LINC00483Q53H64 154 aa13.76□□□□□ -0.21
RHBDD3-205ENST00000488106 MUSTN1Q8IVN3 82 aa13.76□□□□□ -0.21
RHBDD3-205ENST00000488106 A6NDN8 102 aa13.7□□□□□ -0.22
RHBDD3-205ENST00000488106 C6orf99Q4VX62 202 aa13.7□□□□□ -0.22
RHBDD3-205ENST00000488106 RETNLBQ9BQ08 111 aa13.7□□□□□ -0.22
RHBDD3-205ENST00000488106 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
RHBDD3-205ENST00000488106 ST20-AS1Q8NBB2 130 aa13.69□□□□□ -0.22
RHBDD3-205ENST00000488106 Q8NBF4 154 aa13.69□□□□□ -0.22
RHBDD3-205ENST00000488106 COX7BP24311 80 aa13.67□□□□□ -0.22
RHBDD3-205ENST00000488106 MOBPQ13875 183 aa13.67□□□□□ -0.22
RHBDD3-205ENST00000488106 ELOF1P60002 83 aaKnown RBP13.66□□□□□ -0.22
RHBDD3-205ENST00000488106 DHRS4-AS1Q9P1J3 65 aa13.65□□□□□ -0.22
RHBDD3-205ENST00000488106 C4orf48Q5BLP8 95 aa13.64□□□□□ -0.23
RHBDD3-205ENST00000488106 SPAG11AQ6PDA7 123 aa13.63□□□□□ -0.23
RHBDD3-205ENST00000488106 TRAV13-2A0A0B4J235 113 aa13.61□□□□□ -0.23
RHBDD3-205ENST00000488106 COX8AP10176 69 aa13.61□□□□□ -0.23
RHBDD3-205ENST00000488106 C9orf153Q5TBE3 101 aa13.61□□□□□ -0.23
RHBDD3-205ENST00000488106 CTAG1AP78358 180 aa13.59□□□□□ -0.23
RHBDD3-205ENST00000488106 RNF213Q63HN8 5207 aa13.59□□□□□ -0.23
RHBDD3-205ENST00000488106 A4D1N5 150 aa13.58□□□□□ -0.24
RHBDD3-205ENST00000488106 PAM16Q9Y3D7 125 aa13.58□□□□□ -0.24
RHBDD3-205ENST00000488106 TRBV7-6A0A0J9YX20 115 aa13.57□□□□□ -0.24
RHBDD3-205ENST00000488106 A0A1B0GWB2 263 aa13.57□□□□□ -0.24
RHBDD3-205ENST00000488106 SMIM11BQ8TCY0 68 aa13.57□□□□□ -0.24
RHBDD3-205ENST00000488106 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
RHBDD3-205ENST00000488106 HIST1H4GQ99525 98 aa13.56□□□□□ -0.24
RHBDD3-205ENST00000488106 SSBP3-AS1Q7Z2R9 100 aa13.55□□□□□ -0.24
RHBDD3-205ENST00000488106 VAMP8Q9BV40 100 aa13.55□□□□□ -0.24
RHBDD3-205ENST00000488106 C14orf144Q96I85 54 aa13.54□□□□□ -0.24
RHBDD3-205ENST00000488106 C12orf57Q99622 126 aa13.53□□□□□ -0.24
RHBDD3-205ENST00000488106 DLEU1O43261 78 aa13.52□□□□□ -0.25
RHBDD3-205ENST00000488106 SPINK1P00995 79 aa13.52□□□□□ -0.25
RHBDD3-205ENST00000488106 SPRR1BP22528 89 aa13.52□□□□□ -0.25
RHBDD3-205ENST00000488106 DEFB105AQ8NG35 78 aa13.52□□□□□ -0.25
RHBDD3-205ENST00000488106 TAL2Q16559 108 aa13.51□□□□□ -0.25
RHBDD3-205ENST00000488106 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
RHBDD3-205ENST00000488106 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
RHBDD3-205ENST00000488106 IGLV7-46A0A075B6I9 117 aa13.49□□□□□ -0.25
RHBDD3-205ENST00000488106 Q1RN00 199 aa13.48□□□□□ -0.25
RHBDD3-205ENST00000488106 LAMTOR3Q9UHA4 124 aa13.48□□□□□ -0.25
RHBDD3-205ENST00000488106 TEX49A0A1B0GTD5 131 aa13.45□□□□□ -0.26
RHBDD3-205ENST00000488106 NHP2Q9NX24 153 aaKnown RBP13.45□□□□□ -0.26
RHBDD3-205ENST00000488106 VAMP3Q15836 100 aa13.44□□□□□ -0.26
RHBDD3-205ENST00000488106 HIGD1BQ9P298 99 aa13.43□□□□□ -0.26
RHBDD3-205ENST00000488106 RPS29P62273 56 aaKnown RBP13.42□□□□□ -0.26
RHBDD3-205ENST00000488106 C2orf91Q6ZV80 131 aa13.42□□□□□ -0.26
RHBDD3-205ENST00000488106 SLC25A20O43772 301 aa13.41□□□□□ -0.26
RHBDD3-205ENST00000488106 LINC01547P58512 204 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-205ENST00000488106 TPRXLQ17RH7 258 aa13.41□□□□□ -0.26
RHBDD3-205ENST00000488106 FP248Q71RG6 208 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-205ENST00000488106 IGLV5-48A0A075B6I7 105 aa13.4□□□□□ -0.26
RHBDD3-205ENST00000488106 PYY3Q5JQD4 70 aa13.4□□□□□ -0.26
RHBDD3-205ENST00000488106 Q8N377 158 aa13.4□□□□□ -0.26
RHBDD3-205ENST00000488106 HRCT1Q6UXD1 115 aa13.39□□□□□ -0.27
RHBDD3-205ENST00000488106 CDIP1Q9H305 208 aa13.39□□□□□ -0.27
RHBDD3-205ENST00000488106 H7C2G1 150 aa13.38□□□□□ -0.27
RHBDD3-205ENST00000488106 LINC00575Q6W349 94 aa13.37□□□□□ -0.27
RHBDD3-205ENST00000488106 SMIM29Q86T20 159 aa13.37□□□□□ -0.27
RHBDD3-205ENST00000488106 RAB37Q96AX2 223 aa13.36□□□□□ -0.27
RHBDD3-205ENST00000488106 CFC1BP0CG36 223 aa13.35□□□□□ -0.27
RHBDD3-205ENST00000488106 CFC1P0CG37 223 aa13.35□□□□□ -0.27
RHBDD3-205ENST00000488106 hADV29S1A0JD25 119 aa13.33□□□□□ -0.28
RHBDD3-205ENST00000488106 BVES-AS1Q5T3Y7 98 aa13.32□□□□□ -0.28
RHBDD3-205ENST00000488106 Q6ZQY7 126 aa13.32□□□□□ -0.28
RHBDD3-205ENST00000488106 CEND1Q8N111 149 aa13.32□□□□□ -0.28
RHBDD3-205ENST00000488106 PRO1933Q9H354 126 aa13.32□□□□□ -0.28
RHBDD3-205ENST00000488106 A0A0B4J2C4 111 aa13.31□□□□□ -0.28
RHBDD3-205ENST00000488106 LIMD2Q9BT23 127 aa13.29□□□□□ -0.28
RHBDD3-205ENST00000488106 A0A0G2JQZ4 141 aa13.28□□□□□ -0.28
RHBDD3-205ENST00000488106 KRTAP13-3Q3SY46 172 aa13.28□□□□□ -0.28
RHBDD3-205ENST00000488106 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms