RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 A0A1B0GX51 115 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 H3BT86 120 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 SLC25A20O43772 301 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 DNAL4O96015 105 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 C9orf163Q8N9P6 203 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 DIRC1Q969H9 104 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 A0A087WTM6 91 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 TRBV7-6A0A0J9YX20 115 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 C16orf90A8MZG2 172 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 ETDBQ3ZM63 59 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 Q8N814 137 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
SF3A3-206ENST00000487062 A0A096LNI7 61 aa4.53□□□□□ -1.68
SF3A3-206ENST00000487062 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
SF3A3-206ENST00000487062 LINC00474Q9P2X8 69 aa4.53□□□□□ -1.68
SF3A3-206ENST00000487062 STARD9Q9P2P6 4700 aa4.53□□□□□ -1.69
SF3A3-206ENST00000487062 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
SF3A3-206ENST00000487062 COX7BP24311 80 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
SF3A3-206ENST00000487062 TEN1Q86WV5 123 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 C7orf33Q8WU49 177 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 FAM218AQ96MZ4 157 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 C22orf24Q9Y442 160 aa4.52□□□□□ -1.69
SF3A3-206ENST00000487062 A0A087WYN8 130 aa4.51□□□□□ -1.69
SF3A3-206ENST00000487062 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
SF3A3-206ENST00000487062 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
SF3A3-206ENST00000487062 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
SF3A3-206ENST00000487062 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
SF3A3-206ENST00000487062 KCNQ1DNQ9H478 68 aa4.51□□□□□ -1.69
SF3A3-206ENST00000487062 TGP01266 2768 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 IGLV1-50A0A075B6I6 118 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 hADV29S1A0JD25 119 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 H3BQ85 93 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 RTL8CO15255 209 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 ELOF1P60002 83 aaKnown RBP4.5□□□□□ -1.69
SF3A3-206ENST00000487062 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 LINC00167Q96N53 147 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 ORMDL1Q9P0S3 153 aa4.5□□□□□ -1.69
SF3A3-206ENST00000487062 IGLV5-52A0A0A0MRZ9 124 aa4.49□□□□□ -1.69
SF3A3-206ENST00000487062 ETDCA0A1B0GVM5 59 aa4.49□□□□□ -1.69
SF3A3-206ENST00000487062 DPH3Q96FX2 82 aa4.49□□□□□ -1.69
SF3A3-206ENST00000487062 ALMS1Q8TCU4 4167 aa4.48□□□□□ -1.69
SF3A3-206ENST00000487062 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
SF3A3-206ENST00000487062 CHTF8P0CG12 524 aa4.48□□□□□ -1.69
SF3A3-206ENST00000487062 INAFM2P0DMQ5 153 aa4.48□□□□□ -1.69
SF3A3-206ENST00000487062 KRTAP7-1Q8IUC3 87 aa4.48□□□□□ -1.69
SF3A3-206ENST00000487062 LYSTQ99698 3801 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 A0A1W2PNN7 141 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 TMEM256-PLSCR3K7ERE1 68 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
SF3A3-206ENST00000487062 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SF3A3-206ENST00000487062 DNAH10Q8IVF4 4471 aa4.46□□□□□ -1.69
SF3A3-206ENST00000487062 SPRR1AP35321 89 aa4.46□□□□□ -1.7
SF3A3-206ENST00000487062 UBE2BP63146 152 aa4.46□□□□□ -1.7
SF3A3-206ENST00000487062 Q6Q795 121 aa4.46□□□□□ -1.7
SF3A3-206ENST00000487062 SPACA4Q8TDM5 124 aa4.46□□□□□ -1.7
SF3A3-206ENST00000487062 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
SF3A3-206ENST00000487062 LCE6AA0A183 80 aa4.45□□□□□ -1.7
SF3A3-206ENST00000487062 TEX49A0A1B0GTD5 131 aa4.45□□□□□ -1.7
SF3A3-206ENST00000487062 Q6ZQY7 126 aa4.45□□□□□ -1.7
SF3A3-206ENST00000487062 Q6ZRX8 168 aa4.45□□□□□ -1.7
SF3A3-206ENST00000487062 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
SF3A3-206ENST00000487062 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
SF3A3-206ENST00000487062 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
SF3A3-206ENST00000487062 ANAPC13Q9BS18 74 aa4.44□□□□□ -1.7
SF3A3-206ENST00000487062 FAM240AA0A1B0GVK7 77 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 EPM2AB3EWF7 344 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 MT-ATP8P03928 68 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 XGP55808 180 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 LAMTOR3Q9UHA4 124 aa4.43□□□□□ -1.7
SF3A3-206ENST00000487062 PANO1I0J062 215 aa4.42□□□□□ -1.7
SF3A3-206ENST00000487062 ACYP1P07311 99 aa4.42□□□□□ -1.7
SF3A3-206ENST00000487062 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
SF3A3-206ENST00000487062 LINC00336Q6ZUF6 198 aa4.42□□□□□ -1.7
SF3A3-206ENST00000487062 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
SF3A3-206ENST00000487062 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
SF3A3-206ENST00000487062 DNAH17Q9UFH2 4485 aa4.41□□□□□ -1.7
SF3A3-206ENST00000487062 H0Y9J4 135 aa4.41□□□□□ -1.7
SF3A3-206ENST00000487062 Q9BRP9 147 aa4.41□□□□□ -1.7
SF3A3-206ENST00000487062 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
SF3A3-206ENST00000487062 UBE2AP49459 152 aa4.4□□□□□ -1.71
SF3A3-206ENST00000487062 NDUFV3P56181 108 aaKnown RBP4.4□□□□□ -1.71
SF3A3-206ENST00000487062 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
SF3A3-206ENST00000487062 RBM3P98179 157 aaKnown RBP4.4□□□□□ -1.71
SF3A3-206ENST00000487062 IMUPQ9GZP8 106 aa4.4□□□□□ -1.71
SF3A3-206ENST00000487062 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
SF3A3-206ENST00000487062 BCE1O60756 84 aa4.39□□□□□ -1.71
SF3A3-206ENST00000487062 PDE6GP18545 87 aa4.39□□□□□ -1.71
SF3A3-206ENST00000487062 PRLHP81277 87 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms