RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
CTDSPL-208ENST00000486978 TRBV10-3A0A0K0K1G6 114 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 E9PLD3 99 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 SYS1-DBNDD2H3BUS1 97 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 TSPAN13O95857 204 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 SPRR1AP35321 89 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 LINC00337Q8N6G1 96 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 DAND5Q8N907 189 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 HIGD2AQ9BW72 106 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 KCNQ1DNQ9H478 68 aa3.75□□□□□ -1.81
CTDSPL-208ENST00000486978 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 S100A12P80511 92 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 MIEN1Q9BRT3 115 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 ZNF706Q9Y5V0 76 aaPredicted RBP3.74□□□□□ -1.81
CTDSPL-208ENST00000486978 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 C9orf118A6NHY6 69 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 NDUFC2O95298 119 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 DDTP30046 118 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 COA6Q5JTJ3 125 aaKnown RBP3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 LINC01545Q5VT33 79 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 PET117Q6UWS5 81 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 SPRR4Q96PI1 79 aa3.73□□□□□ -1.81
CTDSPL-208ENST00000486978 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 NPC2P61916 151 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 CTAG1AP78358 180 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 S100A7L2Q5SY68 101 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 SOSTDC1Q6X4U4 206 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 C3orf22Q8N5N4 141 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 SMCR5Q8TEV8 140 aa3.72□□□□□ -1.81
CTDSPL-208ENST00000486978 B5MCH6 92 aa3.71□□□□□ -1.82
CTDSPL-208ENST00000486978 TIMM17BO60830 172 aa3.71□□□□□ -1.82
CTDSPL-208ENST00000486978 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
CTDSPL-208ENST00000486978 KRTDAPP60985 99 aa3.71□□□□□ -1.82
CTDSPL-208ENST00000486978 ADAMTSL4-AS1Q5T5F5 129 aa3.71□□□□□ -1.82
CTDSPL-208ENST00000486978 TRAV23DV6A0A075B6W5 121 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 LINC00483Q53H64 154 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 Q6ZRX8 168 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 LITAFQ99732 161 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 USH2AO75445 5202 aa3.7□□□□□ -1.82
CTDSPL-208ENST00000486978 C20orf202A1L168 122 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 ERC2-IT1O76042 136 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 JOSD1Q15040 202 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 Q9BRP9 147 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 TTTY13Q9BZ97 58 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 PPDPFQ9H3Y8 114 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 SPANXCQ9NY87 97 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 CBY1Q9Y3M2 126 aa3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-208ENST00000486978 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-208ENST00000486978 ZNF73O43830 326 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-208ENST00000486978 AKR1D1P51857 326 aa3.68□□□□□ -1.82
CTDSPL-208ENST00000486978 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
CTDSPL-208ENST00000486978 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
CTDSPL-208ENST00000486978 HINT1P49773 126 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 LINC01547P58512 204 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 Q8NBF4 154 aa3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 OR13C6PQ8NH95 151 aa3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
CTDSPL-208ENST00000486978 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 C5orf52A6NGY3 159 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 SPINK1P00995 79 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 MOBPQ13875 183 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 SSBP3-AS1Q7Z2R9 100 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
CTDSPL-208ENST00000486978 IFITM1P13164 125 aa3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 S100A1P23297 94 aa3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 Q6ZVH6 145 aa3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 COPS9Q8WXC6 57 aa3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CTDSPL-208ENST00000486978 S100A2P29034 98 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 RPS29P62273 56 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 SNRPEP62304 92 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 C21orf62-AS1Q17RA5 79 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 PCP2Q8IVA1 136 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 HIST3H2BBQ8N257 126 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 DHRS4-AS1Q9P1J3 65 aa3.64□□□□□ -1.83
CTDSPL-208ENST00000486978 COX7BP24311 80 aa3.63□□□□□ -1.83
CTDSPL-208ENST00000486978 ELOF1P60002 83 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-208ENST00000486978 MT1HP80294 61 aa3.63□□□□□ -1.83
CTDSPL-208ENST00000486978 C6orf99Q4VX62 202 aa3.63□□□□□ -1.83
CTDSPL-208ENST00000486978 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms