RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 HIST1H2BMQ99879 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
CLDN11-207ENST00000486975 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
CLDN11-207ENST00000486975 NCR3O14931 201 aa8.36□□□□□ -1.07
CLDN11-207ENST00000486975 IGKCP01834 107 aa8.36□□□□□ -1.07
CLDN11-207ENST00000486975 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
CLDN11-207ENST00000486975 S100A12P80511 92 aa8.34□□□□□ -1.07
CLDN11-207ENST00000486975 PMCHL2Q9BQD1 86 aa8.34□□□□□ -1.07
CLDN11-207ENST00000486975 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
CLDN11-207ENST00000486975 LGALS3P17931 250 aaKnown RBP8.33□□□□□ -1.08
CLDN11-207ENST00000486975 S100A1P23297 94 aa8.33□□□□□ -1.08
CLDN11-207ENST00000486975 C3orf22Q8N5N4 141 aa8.33□□□□□ -1.08
CLDN11-207ENST00000486975 DAND5Q8N907 189 aa8.33□□□□□ -1.08
CLDN11-207ENST00000486975 NDUFC2O95298 119 aa8.32□□□□□ -1.08
CLDN11-207ENST00000486975 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
CLDN11-207ENST00000486975 MIEN1Q9BRT3 115 aa8.32□□□□□ -1.08
CLDN11-207ENST00000486975 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
CLDN11-207ENST00000486975 E9PLD3 99 aa8.31□□□□□ -1.08
CLDN11-207ENST00000486975 DDTP30046 118 aa8.3□□□□□ -1.08
CLDN11-207ENST00000486975 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
CLDN11-207ENST00000486975 B5MCH6 92 aa8.29□□□□□ -1.08
CLDN11-207ENST00000486975 SYS1-DBNDD2H3BUS1 97 aa8.29□□□□□ -1.08
CLDN11-207ENST00000486975 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
CLDN11-207ENST00000486975 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
CLDN11-207ENST00000486975 RETNLBQ9BQ08 111 aa8.29□□□□□ -1.08
CLDN11-207ENST00000486975 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
CLDN11-207ENST00000486975 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
CLDN11-207ENST00000486975 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
CLDN11-207ENST00000486975 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
CLDN11-207ENST00000486975 Q6ZRX8 168 aa8.27□□□□□ -1.09
CLDN11-207ENST00000486975 ADAMTSL4-AS1Q5T5F5 129 aa8.26□□□□□ -1.09
CLDN11-207ENST00000486975 LINC01545Q5VT33 79 aa8.26□□□□□ -1.09
CLDN11-207ENST00000486975 SOSTDC1Q6X4U4 206 aa8.26□□□□□ -1.09
CLDN11-207ENST00000486975 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
CLDN11-207ENST00000486975 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
CLDN11-207ENST00000486975 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
CLDN11-207ENST00000486975 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 TIMM17BO60830 172 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 KRTAP5-3Q6L8H2 238 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 Q8NBF4 154 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 Q9BRP9 147 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 PPDPFQ9H3Y8 114 aa8.24□□□□□ -1.09
CLDN11-207ENST00000486975 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
CLDN11-207ENST00000486975 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
CLDN11-207ENST00000486975 LITAFQ99732 161 aa8.23□□□□□ -1.09
CLDN11-207ENST00000486975 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
CLDN11-207ENST00000486975 MUC2Q02817 5179 aa8.22□□□□□ -1.09
CLDN11-207ENST00000486975 SPINK1P00995 79 aa8.22□□□□□ -1.09
CLDN11-207ENST00000486975 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
CLDN11-207ENST00000486975 GAGE2AQ6NT46 116 aa8.22□□□□□ -1.09
CLDN11-207ENST00000486975 SPANXCQ9NY87 97 aa8.22□□□□□ -1.09
CLDN11-207ENST00000486975 ZNF73O43830 326 aaPredicted RBP8.21□□□□□ -1.1
CLDN11-207ENST00000486975 NPC2P61916 151 aa8.21□□□□□ -1.1
CLDN11-207ENST00000486975 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
CLDN11-207ENST00000486975 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
CLDN11-207ENST00000486975 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
CLDN11-207ENST00000486975 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
CLDN11-207ENST00000486975 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
CLDN11-207ENST00000486975 C3orf79P0CE67 100 aa8.2□□□□□ -1.1
CLDN11-207ENST00000486975 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
CLDN11-207ENST00000486975 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
CLDN11-207ENST00000486975 KRTDAPP60985 99 aa8.18□□□□□ -1.1
CLDN11-207ENST00000486975 MOBPQ13875 183 aa8.18□□□□□ -1.1
CLDN11-207ENST00000486975 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
CLDN11-207ENST00000486975 HINT1P49773 126 aaPredicted RBP8.16□□□□□ -1.1
CLDN11-207ENST00000486975 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
CLDN11-207ENST00000486975 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
CLDN11-207ENST00000486975 C20orf202A1L168 122 aa8.14□□□□□ -1.11
CLDN11-207ENST00000486975 LINC00518Q8N0U6 118 aa8.14□□□□□ -1.11
CLDN11-207ENST00000486975 S100A6P06703 90 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 SPRR1BP22528 89 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 S100A2P29034 98 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 MUC17Q685J3 4493 aa8.13□□□□□ -1.11
CLDN11-207ENST00000486975 AKR1D1P51857 326 aa8.12□□□□□ -1.11
CLDN11-207ENST00000486975 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
CLDN11-207ENST00000486975 Q8N377 158 aa8.12□□□□□ -1.11
CLDN11-207ENST00000486975 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
CLDN11-207ENST00000486975 SLC25A20O43772 301 aa8.1□□□□□ -1.11
CLDN11-207ENST00000486975 ELOF1P60002 83 aaKnown RBP8.1□□□□□ -1.11
CLDN11-207ENST00000486975 SCGB1D4Q6XE38 83 aa8.1□□□□□ -1.11
CLDN11-207ENST00000486975 COPS9Q8WXC6 57 aa8.1□□□□□ -1.11
CLDN11-207ENST00000486975 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
CLDN11-207ENST00000486975 IFITM1P13164 125 aa8.09□□□□□ -1.11
CLDN11-207ENST00000486975 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
CLDN11-207ENST00000486975 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
CLDN11-207ENST00000486975 Q6ZVH6 145 aa8.09□□□□□ -1.11
CLDN11-207ENST00000486975 COX7BP24311 80 aa8.08□□□□□ -1.12
CLDN11-207ENST00000486975 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
CLDN11-207ENST00000486975 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
CLDN11-207ENST00000486975 SNRPEP62304 92 aaKnown RBP8.07□□□□□ -1.12
CLDN11-207ENST00000486975 C6orf99Q4VX62 202 aa8.07□□□□□ -1.12
CLDN11-207ENST00000486975 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
CLDN11-207ENST00000486975 PCP2Q8IVA1 136 aa8.04□□□□□ -1.12
CLDN11-207ENST00000486975 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
CLDN11-207ENST00000486975 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
CLDN11-207ENST00000486975 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
CLDN11-207ENST00000486975 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms