RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
GMDS-205ENST00000486793 PLNP26678 52 aa10.25□□□□□ -0.77
GMDS-205ENST00000486793 NMUP48645 174 aa10.25□□□□□ -0.77
GMDS-205ENST00000486793 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
GMDS-205ENST00000486793 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
GMDS-205ENST00000486793 LGALS3P17931 250 aaKnown RBP10.24□□□□□ -0.77
GMDS-205ENST00000486793 NPC2P61916 151 aa10.24□□□□□ -0.77
GMDS-205ENST00000486793 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
GMDS-205ENST00000486793 PMCHL2Q9BQD1 86 aa10.24□□□□□ -0.77
GMDS-205ENST00000486793 DPM2O94777 84 aa10.23□□□□□ -0.77
GMDS-205ENST00000486793 HERVK_113P61574 105 aa10.23□□□□□ -0.77
GMDS-205ENST00000486793 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
GMDS-205ENST00000486793 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
GMDS-205ENST00000486793 MT1HP80294 61 aa10.22□□□□□ -0.77
GMDS-205ENST00000486793 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
GMDS-205ENST00000486793 IGLV8-61A0A075B6I0 122 aa10.21□□□□□ -0.77
GMDS-205ENST00000486793 LINC00310P59036 64 aa10.21□□□□□ -0.77
GMDS-205ENST00000486793 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
GMDS-205ENST00000486793 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
GMDS-205ENST00000486793 SERF1AO75920 110 aa10.2□□□□□ -0.78
GMDS-205ENST00000486793 IGKCP01834 107 aa10.2□□□□□ -0.78
GMDS-205ENST00000486793 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
GMDS-205ENST00000486793 TRGC2P03986 189 aa10.19□□□□□ -0.78
GMDS-205ENST00000486793 FABP4P15090 132 aa10.19□□□□□ -0.78
GMDS-205ENST00000486793 SPRR1BP22528 89 aa10.19□□□□□ -0.78
GMDS-205ENST00000486793 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
GMDS-205ENST00000486793 HSPB8Q9UJY1 196 aa10.18□□□□□ -0.78
GMDS-205ENST00000486793 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
GMDS-205ENST00000486793 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.78
GMDS-205ENST00000486793 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
GMDS-205ENST00000486793 CFC1BP0CG36 223 aa10.14□□□□□ -0.79
GMDS-205ENST00000486793 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
GMDS-205ENST00000486793 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
GMDS-205ENST00000486793 E9PLD3 99 aa10.12□□□□□ -0.79
GMDS-205ENST00000486793 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
GMDS-205ENST00000486793 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
GMDS-205ENST00000486793 LITAFQ99732 161 aa10.11□□□□□ -0.79
GMDS-205ENST00000486793 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
GMDS-205ENST00000486793 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
GMDS-205ENST00000486793 H7C2G1 150 aa10.08□□□□□ -0.8
GMDS-205ENST00000486793 KRTAP10-6P60371 365 aaPredicted RBP10.08□□□□□ -0.8
GMDS-205ENST00000486793 CD164Q04900 197 aa10.08□□□□□ -0.8
GMDS-205ENST00000486793 TAL2Q16559 108 aa10.08□□□□□ -0.8
GMDS-205ENST00000486793 Q1RN00 199 aa10.08□□□□□ -0.8
GMDS-205ENST00000486793 COX7BP24311 80 aa10.07□□□□□ -0.8
GMDS-205ENST00000486793 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
GMDS-205ENST00000486793 PRO1933Q9H354 126 aa10.07□□□□□ -0.8
GMDS-205ENST00000486793 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
GMDS-205ENST00000486793 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
GMDS-205ENST00000486793 TEX49A0A1B0GTD5 131 aa10.04□□□□□ -0.8
GMDS-205ENST00000486793 TIMM17BO60830 172 aa10.04□□□□□ -0.8
GMDS-205ENST00000486793 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
GMDS-205ENST00000486793 Q5XG85 94 aa10.03□□□□□ -0.8
GMDS-205ENST00000486793 AKR1D1P51857 326 aa10.02□□□□□ -0.81
GMDS-205ENST00000486793 SMIM29Q86T20 159 aa10.02□□□□□ -0.81
GMDS-205ENST00000486793 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
GMDS-205ENST00000486793 M0R2T5 61 aa10.01□□□□□ -0.81
GMDS-205ENST00000486793 LINC00518Q8N0U6 118 aa10.01□□□□□ -0.81
GMDS-205ENST00000486793 A0A0G2JQZ4 141 aa10□□□□□ -0.81
GMDS-205ENST00000486793 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
GMDS-205ENST00000486793 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
GMDS-205ENST00000486793 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
GMDS-205ENST00000486793 COLCA2A8K830 154 aa9.98□□□□□ -0.81
GMDS-205ENST00000486793 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
GMDS-205ENST00000486793 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.82
GMDS-205ENST00000486793 LINC01545Q5VT33 79 aa9.95□□□□□ -0.82
GMDS-205ENST00000486793 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
GMDS-205ENST00000486793 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
GMDS-205ENST00000486793 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
GMDS-205ENST00000486793 PET117Q6UWS5 81 aa9.92□□□□□ -0.82
GMDS-205ENST00000486793 A6NDN8 102 aa9.91□□□□□ -0.82
GMDS-205ENST00000486793 TCL1BO95988 128 aa9.88□□□□□ -0.83
GMDS-205ENST00000486793 SCGB1D4Q6XE38 83 aa9.88□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BKO60814 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BJP06899 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BOP23527 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BBP33778 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BDP58876 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BCP62807 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST2H2BEQ16778 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BHQ93079 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BNQ99877 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 HIST1H2BMQ99879 126 aa9.87□□□□□ -0.83
GMDS-205ENST00000486793 A4D1N5 150 aa9.85□□□□□ -0.83
GMDS-205ENST00000486793 IFITM1P13164 125 aa9.85□□□□□ -0.83
GMDS-205ENST00000486793 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
GMDS-205ENST00000486793 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
GMDS-205ENST00000486793 SLC7A5P1Q8MH63 180 aa9.84□□□□□ -0.83
GMDS-205ENST00000486793 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
GMDS-205ENST00000486793 NHP2Q9NX24 153 aaKnown RBP9.82□□□□□ -0.84
GMDS-205ENST00000486793 Q6ZVH6 145 aa9.81□□□□□ -0.84
GMDS-205ENST00000486793 SMIM11BQ8TCY0 68 aa9.81□□□□□ -0.84
GMDS-205ENST00000486793 ANKRD39Q53RE8 183 aa9.8□□□□□ -0.84
GMDS-205ENST00000486793 KRTDAPP60985 99 aa9.79□□□□□ -0.84
GMDS-205ENST00000486793 Q6Q795 121 aa9.79□□□□□ -0.84
GMDS-205ENST00000486793 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
GMDS-205ENST00000486793 F8WEM9 126 aa9.78□□□□□ -0.84
GMDS-205ENST00000486793 PCP2Q8IVA1 136 aa9.78□□□□□ -0.84
GMDS-205ENST00000486793 ATP11AUNQ6ZP68 121 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms