RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 CARD19Q96LW7 228 aa4.13□□□□□ -1.75
TMEM39A-209ENST00000486235 Q9UF83 564 aa4.13□□□□□ -1.75
TMEM39A-209ENST00000486235 C9JAW5 83 aa4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 I3L3M4 83 aa4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 RNASE3P12724 160 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 CIRBPQ14011 172 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 C9orf85Q96MD7 179 aa4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 AMELXQ99217 191 aa4.12□□□□□ -1.75
TMEM39A-209ENST00000486235 TRBV7-7A0A0K0K1E9 115 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 TINCRA0A1B0GVN0 87 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 PANO1I0J062 215 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 MIAQ16674 131 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 Q1RN00 199 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 Q6ZRU5 148 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 RPL39LQ96EH5 51 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 TIMM21Q9BVV7 248 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 JPT2Q9H910 190 aa4.11□□□□□ -1.75
TMEM39A-209ENST00000486235 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
TMEM39A-209ENST00000486235 CXCL5P42830 114 aa4.1□□□□□ -1.75
TMEM39A-209ENST00000486235 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
TMEM39A-209ENST00000486235 SMIM1B2RUZ4 78 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 M0QY20 66 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 LST1O00453 97 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 CRPP02741 224 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 ZNF56Q15929 161 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
TMEM39A-209ENST00000486235 IGLV4-3A0A075B6K6 122 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 TRACP01848 142 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 LINC00643Q86TS7 51 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 MUSTN1Q8IVN3 82 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 DAND5Q8N907 189 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 C9orf163Q8N9P6 203 aa4.08□□□□□ -1.76
TMEM39A-209ENST00000486235 NDUFA1O15239 70 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 CHTF8P0CG12 524 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 TSPEAR-AS2P59090 65 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 FAM19A3Q7Z5A8 133 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 DPH3Q96FX2 82 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 CHCHD7Q9BUK0 85 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
TMEM39A-209ENST00000486235 COX7A2LO14548 114 aa4.06□□□□□ -1.76
TMEM39A-209ENST00000486235 RPL39P62891 51 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-209ENST00000486235 HERVK_113P63121 156 aa4.06□□□□□ -1.76
TMEM39A-209ENST00000486235 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
TMEM39A-209ENST00000486235 LITAFQ99732 161 aa4.06□□□□□ -1.76
TMEM39A-209ENST00000486235 H7C423 109 aa4.05□□□□□ -1.76
TMEM39A-209ENST00000486235 UQCRQO14949 82 aa4.05□□□□□ -1.76
TMEM39A-209ENST00000486235 CHCHD5Q9BSY4 110 aa4.05□□□□□ -1.76
TMEM39A-209ENST00000486235 IGLV10-54A0A075B6I4 117 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 TRBV6-8A0A0A6YYG3 113 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 A0A0J9YXV3 536 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 A0A1B0GX51 115 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
TMEM39A-209ENST00000486235 IGHV3-64A0A075B6Q5 118 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 ATOX1O00244 68 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 S100A7L2Q5SY68 101 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 LINC00269Q8N2A0 174 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 SPACA4Q8TDM5 124 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 UBE2D4Q9Y2X8 147 aa4.03□□□□□ -1.76
TMEM39A-209ENST00000486235 H0YGX0 51 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 CNBPP62633 177 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 ATP5EP2Q5VTU8 51 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 Q6ZRP5 223 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 LINC00526Q96FQ7 95 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 PRR34Q9NV39 138 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
TMEM39A-209ENST00000486235 LPAP08519 4548 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 IGKV2-24A0A0C4DH68 120 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 H7C2G1 150 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 RPL28P46779 137 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 NTM-AS1Q6ZSK4 140 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 LINC00308Q8TCZ7 52 aa4.01□□□□□ -1.77
TMEM39A-209ENST00000486235 H3BQ85 93 aa4□□□□□ -1.77
TMEM39A-209ENST00000486235 CCDC179H3BU77 68 aa4□□□□□ -1.77
TMEM39A-209ENST00000486235 J3KT08 172 aa4□□□□□ -1.77
TMEM39A-209ENST00000486235 BCE1O60756 84 aa4□□□□□ -1.77
TMEM39A-209ENST00000486235 DNAL4O96015 105 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms