RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
MCF2L-226ENST00000486210 LINC00337Q8N6G1 96 aa10.67□□□□□ -0.7
MCF2L-226ENST00000486210 A4D1N5 150 aa10.66□□□□□ -0.7
MCF2L-226ENST00000486210 DDTP30046 118 aa10.66□□□□□ -0.7
MCF2L-226ENST00000486210 DIRC1Q969H9 104 aa10.66□□□□□ -0.7
MCF2L-226ENST00000486210 IGLV6-57P01721 117 aa10.65□□□□□ -0.7
MCF2L-226ENST00000486210 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.7
MCF2L-226ENST00000486210 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
MCF2L-226ENST00000486210 KRTAP9-2Q9BYQ4 174 aa10.65□□□□□ -0.7
MCF2L-226ENST00000486210 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
MCF2L-226ENST00000486210 IGLV7-43P04211 117 aa10.63□□□□□ -0.71
MCF2L-226ENST00000486210 TAL2Q16559 108 aa10.63□□□□□ -0.71
MCF2L-226ENST00000486210 OR13C6PQ8NH95 151 aa10.63□□□□□ -0.71
MCF2L-226ENST00000486210 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
MCF2L-226ENST00000486210 PRYO14603 147 aa10.62□□□□□ -0.71
MCF2L-226ENST00000486210 BCE1O60756 84 aa10.62□□□□□ -0.71
MCF2L-226ENST00000486210 CEND1Q8N111 149 aa10.62□□□□□ -0.71
MCF2L-226ENST00000486210 HSD52Q0P140 79 aa10.6□□□□□ -0.71
MCF2L-226ENST00000486210 TRAV23DV6A0A075B6W5 121 aa10.59□□□□□ -0.71
MCF2L-226ENST00000486210 SPRR1AP35321 89 aa10.59□□□□□ -0.71
MCF2L-226ENST00000486210 FXYD2P54710 66 aa10.59□□□□□ -0.71
MCF2L-226ENST00000486210 A6NDN8 102 aa10.58□□□□□ -0.72
MCF2L-226ENST00000486210 H0Y9J4 135 aa10.58□□□□□ -0.72
MCF2L-226ENST00000486210 FAM19A1Q7Z5A9 133 aa10.58□□□□□ -0.72
MCF2L-226ENST00000486210 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
MCF2L-226ENST00000486210 KRTAP4-16G5E9R7 235 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-226ENST00000486210 CFC1BP0CG36 223 aa10.57□□□□□ -0.72
MCF2L-226ENST00000486210 CFC1P0CG37 223 aa10.57□□□□□ -0.72
MCF2L-226ENST00000486210 PRLHP81277 87 aa10.57□□□□□ -0.72
MCF2L-226ENST00000486210 KRTAP13-1Q8IUC0 172 aa10.57□□□□□ -0.72
MCF2L-226ENST00000486210 ZNF861PO60384 105 aa10.56□□□□□ -0.72
MCF2L-226ENST00000486210 UBE2AP49459 152 aa10.56□□□□□ -0.72
MCF2L-226ENST00000486210 PRR26Q8N8Z3 221 aa10.56□□□□□ -0.72
MCF2L-226ENST00000486210 TSTD3H0UI37 97 aa10.55□□□□□ -0.72
MCF2L-226ENST00000486210 ZNF73O43830 326 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-226ENST00000486210 CTAG1AP78358 180 aa10.54□□□□□ -0.72
MCF2L-226ENST00000486210 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
MCF2L-226ENST00000486210 B5MCH6 92 aa10.52□□□□□ -0.73
MCF2L-226ENST00000486210 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
MCF2L-226ENST00000486210 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
MCF2L-226ENST00000486210 SMIM11BQ8TCY0 68 aa10.52□□□□□ -0.73
MCF2L-226ENST00000486210 FAT4Q6V0I7 4981 aa10.52□□□□□ -0.73
MCF2L-226ENST00000486210 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
MCF2L-226ENST00000486210 C6orf99Q4VX62 202 aa10.51□□□□□ -0.73
MCF2L-226ENST00000486210 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
MCF2L-226ENST00000486210 TMEM238LA0A1B0GVL6 79 aa10.5□□□□□ -0.73
MCF2L-226ENST00000486210 A6NJY4 79 aa10.5□□□□□ -0.73
MCF2L-226ENST00000486210 RAB37Q96AX2 223 aa10.5□□□□□ -0.73
MCF2L-226ENST00000486210 CBY1Q9Y3M2 126 aa10.5□□□□□ -0.73
MCF2L-226ENST00000486210 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
MCF2L-226ENST00000486210 K7ERJ3 54 aa10.48□□□□□ -0.73
MCF2L-226ENST00000486210 HINT1P49773 126 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-226ENST00000486210 H7C2G1 150 aa10.47□□□□□ -0.73
MCF2L-226ENST00000486210 Q6ZRX8 168 aa10.47□□□□□ -0.73
MCF2L-226ENST00000486210 SMCR5Q8TEV8 140 aa10.47□□□□□ -0.73
MCF2L-226ENST00000486210 Q9BRP9 147 aa10.47□□□□□ -0.73
MCF2L-226ENST00000486210 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
MCF2L-226ENST00000486210 A0A1B0GWB2 263 aa10.45□□□□□ -0.74
MCF2L-226ENST00000486210 ERC2-IT1O76042 136 aa10.45□□□□□ -0.74
MCF2L-226ENST00000486210 COX7BP24311 80 aa10.45□□□□□ -0.74
MCF2L-226ENST00000486210 LCE2AQ5TA79 106 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-226ENST00000486210 PRO1854Q9UHT4 67 aa10.45□□□□□ -0.74
MCF2L-226ENST00000486210 KRTAP9-6A0A140TA67 174 aa10.44□□□□□ -0.74
MCF2L-226ENST00000486210 KRTAP1-4P0C5Y4 121 aa10.44□□□□□ -0.74
MCF2L-226ENST00000486210 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
MCF2L-226ENST00000486210 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
MCF2L-226ENST00000486210 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
MCF2L-226ENST00000486210 M0R143 59 aa10.42□□□□□ -0.74
MCF2L-226ENST00000486210 PRR4Q16378 134 aa10.42□□□□□ -0.74
MCF2L-226ENST00000486210 Q1RN00 199 aa10.4□□□□□ -0.74
MCF2L-226ENST00000486210 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
MCF2L-226ENST00000486210 TSPAN13O95857 204 aa10.37□□□□□ -0.75
MCF2L-226ENST00000486210 ST20-AS1Q8NBB2 130 aa10.37□□□□□ -0.75
MCF2L-226ENST00000486210 VAMP3Q15836 100 aa10.36□□□□□ -0.75
MCF2L-226ENST00000486210 BATFQ16520 125 aa10.36□□□□□ -0.75
MCF2L-226ENST00000486210 SPRR4Q96PI1 79 aa10.36□□□□□ -0.75
MCF2L-226ENST00000486210 DHRS4-AS1Q9P1J3 65 aa10.36□□□□□ -0.75
MCF2L-226ENST00000486210 TRIAP1O43715 76 aa10.35□□□□□ -0.75
MCF2L-226ENST00000486210 LINC00575Q6W349 94 aa10.34□□□□□ -0.75
MCF2L-226ENST00000486210 MUC17Q685J3 4493 aa10.33□□□□□ -0.76
MCF2L-226ENST00000486210 CRYGAP11844 174 aa10.32□□□□□ -0.76
MCF2L-226ENST00000486210 GAGE2AQ6NT46 116 aa10.32□□□□□ -0.76
MCF2L-226ENST00000486210 ZNF706Q9Y5V0 76 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-226ENST00000486210 A0A087X002 238 aa10.31□□□□□ -0.76
MCF2L-226ENST00000486210 PCP4L1A6NKN8 68 aa10.31□□□□□ -0.76
MCF2L-226ENST00000486210 PSMB2P49721 201 aa10.31□□□□□ -0.76
MCF2L-226ENST00000486210 TYMSOSQ8TAI1 123 aa10.31□□□□□ -0.76
MCF2L-226ENST00000486210 FAM218AQ96MZ4 157 aa10.31□□□□□ -0.76
MCF2L-226ENST00000486210 hADV29S1A0JD25 119 aa10.29□□□□□ -0.76
MCF2L-226ENST00000486210 H0YGX0 51 aa10.29□□□□□ -0.76
MCF2L-226ENST00000486210 LINC00483Q53H64 154 aa10.29□□□□□ -0.76
MCF2L-226ENST00000486210 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
MCF2L-226ENST00000486210 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
MCF2L-226ENST00000486210 SLC25A20O43772 301 aa10.28□□□□□ -0.76
MCF2L-226ENST00000486210 LINC01547P58512 204 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-226ENST00000486210 FAM229BQ4G0N7 80 aa10.27□□□□□ -0.77
MCF2L-226ENST00000486210 KRTAP13-2Q52LG2 175 aa10.27□□□□□ -0.77
MCF2L-226ENST00000486210 CLEC2BQ92478 149 aa10.27□□□□□ -0.77
MCF2L-226ENST00000486210 DEFB105AQ8NG35 78 aa10.26□□□□□ -0.77
MCF2L-226ENST00000486210 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms