RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
APOE-205ENST00000485628 BCE1O60756 84 aa9.69□□□□□ -0.86
APOE-205ENST00000485628 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
APOE-205ENST00000485628 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
APOE-205ENST00000485628 NHP2Q9NX24 153 aaKnown RBP9.69□□□□□ -0.86
APOE-205ENST00000485628 PRO1854Q9UHT4 67 aa9.69□□□□□ -0.86
APOE-205ENST00000485628 CBY1Q9Y3M2 126 aa9.69□□□□□ -0.86
APOE-205ENST00000485628 H0Y9J4 135 aa9.68□□□□□ -0.86
APOE-205ENST00000485628 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
APOE-205ENST00000485628 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
APOE-205ENST00000485628 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
APOE-205ENST00000485628 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
APOE-205ENST00000485628 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
APOE-205ENST00000485628 RAB37Q96AX2 223 aa9.67□□□□□ -0.86
APOE-205ENST00000485628 SRRM2Q9UQ35 2752 aaKnown RBP9.66□□□□□ -0.86
APOE-205ENST00000485628 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
APOE-205ENST00000485628 B5MCH6 92 aa9.66□□□□□ -0.86
APOE-205ENST00000485628 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
APOE-205ENST00000485628 Q5VSD8 79 aa9.66□□□□□ -0.86
APOE-205ENST00000485628 K7ERJ3 54 aa9.65□□□□□ -0.86
APOE-205ENST00000485628 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
APOE-205ENST00000485628 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
APOE-205ENST00000485628 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
APOE-205ENST00000485628 ZNF861PO60384 105 aa9.63□□□□□ -0.87
APOE-205ENST00000485628 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
APOE-205ENST00000485628 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
APOE-205ENST00000485628 Q6ZRX8 168 aa9.62□□□□□ -0.87
APOE-205ENST00000485628 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
APOE-205ENST00000485628 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
APOE-205ENST00000485628 TSPAN13O95857 204 aa9.61□□□□□ -0.87
APOE-205ENST00000485628 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
APOE-205ENST00000485628 Q9BRP9 147 aa9.61□□□□□ -0.87
APOE-205ENST00000485628 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
APOE-205ENST00000485628 SMCR5Q8TEV8 140 aa9.6□□□□□ -0.87
APOE-205ENST00000485628 PCP4L1A6NKN8 68 aa9.59□□□□□ -0.87
APOE-205ENST00000485628 PRLHP81277 87 aa9.59□□□□□ -0.87
APOE-205ENST00000485628 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
APOE-205ENST00000485628 H7C2G1 150 aa9.57□□□□□ -0.88
APOE-205ENST00000485628 TRIAP1O43715 76 aa9.57□□□□□ -0.88
APOE-205ENST00000485628 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
APOE-205ENST00000485628 COX7BP24311 80 aa9.57□□□□□ -0.88
APOE-205ENST00000485628 UBE2AP49459 152 aa9.57□□□□□ -0.88
APOE-205ENST00000485628 BATFQ16520 125 aa9.56□□□□□ -0.88
APOE-205ENST00000485628 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
APOE-205ENST00000485628 ERC2-IT1O76042 136 aa9.55□□□□□ -0.88
APOE-205ENST00000485628 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
APOE-205ENST00000485628 H0YGX0 51 aa9.53□□□□□ -0.88
APOE-205ENST00000485628 VAMP3Q15836 100 aa9.53□□□□□ -0.88
APOE-205ENST00000485628 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
APOE-205ENST00000485628 Q1RN00 199 aa9.52□□□□□ -0.89
APOE-205ENST00000485628 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
APOE-205ENST00000485628 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
APOE-205ENST00000485628 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
APOE-205ENST00000485628 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
APOE-205ENST00000485628 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
APOE-205ENST00000485628 A0A1B0GX51 115 aa9.48□□□□□ -0.89
APOE-205ENST00000485628 hADV29S1A0JD25 119 aa9.47□□□□□ -0.89
APOE-205ENST00000485628 COX6CP09669 75 aa9.47□□□□□ -0.89
APOE-205ENST00000485628 PSMB2P49721 201 aa9.47□□□□□ -0.89
APOE-205ENST00000485628 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
APOE-205ENST00000485628 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
APOE-205ENST00000485628 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
APOE-205ENST00000485628 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
APOE-205ENST00000485628 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.89
APOE-205ENST00000485628 ABCA13Q86UQ4 5058 aa9.46□□□□□ -0.89
APOE-205ENST00000485628 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
APOE-205ENST00000485628 H3BUT2 72 aa9.45□□□□□ -0.9
APOE-205ENST00000485628 SPRR1BP22528 89 aa9.45□□□□□ -0.9
APOE-205ENST00000485628 ST20-AS1Q8NBB2 130 aa9.45□□□□□ -0.9
APOE-205ENST00000485628 CLEC2BQ92478 149 aa9.45□□□□□ -0.9
APOE-205ENST00000485628 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
APOE-205ENST00000485628 LST1O00453 97 aa9.43□□□□□ -0.9
APOE-205ENST00000485628 SLC25A20O43772 301 aa9.43□□□□□ -0.9
APOE-205ENST00000485628 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
APOE-205ENST00000485628 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
APOE-205ENST00000485628 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
APOE-205ENST00000485628 MYCBP2O75592 4640 aa9.42□□□□□ -0.9
APOE-205ENST00000485628 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
APOE-205ENST00000485628 TCL1BO95988 128 aa9.41□□□□□ -0.9
APOE-205ENST00000485628 TRACP01848 142 aa9.41□□□□□ -0.9
APOE-205ENST00000485628 Q6ZQY7 126 aa9.41□□□□□ -0.9
APOE-205ENST00000485628 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
APOE-205ENST00000485628 SCGB1C2P0DMR2 95 aa9.4□□□□□ -0.9
APOE-205ENST00000485628 FAM229BQ4G0N7 80 aa9.4□□□□□ -0.9
APOE-205ENST00000485628 Q8N377 158 aa9.4□□□□□ -0.9
APOE-205ENST00000485628 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
APOE-205ENST00000485628 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
APOE-205ENST00000485628 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
APOE-205ENST00000485628 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
APOE-205ENST00000485628 A0A087X002 238 aa9.37□□□□□ -0.91
APOE-205ENST00000485628 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
APOE-205ENST00000485628 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
APOE-205ENST00000485628 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
APOE-205ENST00000485628 PPDPFLQ8WWR9 84 aa9.37□□□□□ -0.91
APOE-205ENST00000485628 SNCGO76070 127 aa9.36□□□□□ -0.91
APOE-205ENST00000485628 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
APOE-205ENST00000485628 KRTAP13-2Q52LG2 175 aa9.36□□□□□ -0.91
APOE-205ENST00000485628 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
APOE-205ENST00000485628 OXTP01178 125 aa9.35□□□□□ -0.91
APOE-205ENST00000485628 FABP2P12104 132 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms