RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TRGC2P03986 189 aa6□□□□□ -1.45
HMGN1-215ENST00000485550 PMCHL2Q9BQD1 86 aa6□□□□□ -1.45
HMGN1-215ENST00000485550 LEPROTO15243 131 aa5.99□□□□□ -1.45
HMGN1-215ENST00000485550 ERC2-IT1O76042 136 aa5.99□□□□□ -1.45
HMGN1-215ENST00000485550 FABP4P15090 132 aa5.99□□□□□ -1.45
HMGN1-215ENST00000485550 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 B5MCH6 92 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 SERF1AO75920 110 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 DDTP30046 118 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 S100A12P80511 92 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
HMGN1-215ENST00000485550 J3QQQ9 107 aa5.97□□□□□ -1.45
HMGN1-215ENST00000485550 NPC2P61916 151 aa5.96□□□□□ -1.46
HMGN1-215ENST00000485550 MOBPQ13875 183 aa5.96□□□□□ -1.46
HMGN1-215ENST00000485550 LINC00483Q53H64 154 aa5.96□□□□□ -1.46
HMGN1-215ENST00000485550 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-215ENST00000485550 Q9BRP9 147 aa5.96□□□□□ -1.46
HMGN1-215ENST00000485550 LOC107984156A0A0G2JMH3 177 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 TRBV10-2A0A0K0K1G8 114 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 DPM2O94777 84 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 SPINK1P00995 79 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 IGKCP01834 107 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
HMGN1-215ENST00000485550 PLNP26678 52 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 HERVK_113P61574 105 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 KRTAP13-3Q3SY46 172 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 ARL17AQ8IVW1 177 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 MIEN1Q9BRT3 115 aa5.95□□□□□ -1.46
HMGN1-215ENST00000485550 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
HMGN1-215ENST00000485550 HSPB8Q9UJY1 196 aa5.94□□□□□ -1.46
HMGN1-215ENST00000485550 NMUP48645 174 aa5.93□□□□□ -1.46
HMGN1-215ENST00000485550 SOSTDC1Q6X4U4 206 aa5.93□□□□□ -1.46
HMGN1-215ENST00000485550 Q6ZRX8 168 aa5.93□□□□□ -1.46
HMGN1-215ENST00000485550 SSBP3-AS1Q7Z2R9 100 aa5.93□□□□□ -1.46
HMGN1-215ENST00000485550 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
HMGN1-215ENST00000485550 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
HMGN1-215ENST00000485550 IGLV6-57P01721 117 aa5.92□□□□□ -1.46
HMGN1-215ENST00000485550 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
HMGN1-215ENST00000485550 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
HMGN1-215ENST00000485550 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
HMGN1-215ENST00000485550 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 NDUFC2O95298 119 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 SLC7A5P1Q8MH63 180 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 Q8N377 158 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 ST20-AS1Q8NBB2 130 aa5.91□□□□□ -1.46
HMGN1-215ENST00000485550 COLCA2A8K830 154 aa5.9□□□□□ -1.46
HMGN1-215ENST00000485550 ZNF73O43830 326 aaPredicted RBP5.9□□□□□ -1.46
HMGN1-215ENST00000485550 JOSD1Q15040 202 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-215ENST00000485550 E9PLD3 99 aa5.88□□□□□ -1.47
HMGN1-215ENST00000485550 SLC25A20O43772 301 aa5.88□□□□□ -1.47
HMGN1-215ENST00000485550 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
HMGN1-215ENST00000485550 HINT1P49773 126 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-215ENST00000485550 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
HMGN1-215ENST00000485550 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
HMGN1-215ENST00000485550 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
HMGN1-215ENST00000485550 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
HMGN1-215ENST00000485550 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
HMGN1-215ENST00000485550 LITAFQ99732 161 aa5.85□□□□□ -1.47
HMGN1-215ENST00000485550 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
HMGN1-215ENST00000485550 SPANXCQ9NY87 97 aa5.84□□□□□ -1.47
HMGN1-215ENST00000485550 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BKO60814 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BJP06899 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BOP23527 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BBP33778 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BDP58876 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BCP62807 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 MT1HP80294 61 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST2H2BEQ16778 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BHQ93079 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BNQ99877 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 HIST1H2BMQ99879 126 aa5.83□□□□□ -1.48
HMGN1-215ENST00000485550 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
HMGN1-215ENST00000485550 DEFB105AQ8NG35 78 aa5.82□□□□□ -1.48
HMGN1-215ENST00000485550 CBY1Q9Y3M2 126 aa5.82□□□□□ -1.48
HMGN1-215ENST00000485550 C5orf52A6NGY3 159 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 TIMM17BO60830 172 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 SPRR1BP22528 89 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 PET117Q6UWS5 81 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 DHRS4-AS1Q9P1J3 65 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 LAMTOR3Q9UHA4 124 aa5.81□□□□□ -1.48
HMGN1-215ENST00000485550 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
HMGN1-215ENST00000485550 COX7BP24311 80 aa5.8□□□□□ -1.48
HMGN1-215ENST00000485550 TAL2Q16559 108 aa5.8□□□□□ -1.48
HMGN1-215ENST00000485550 Q1RN00 199 aa5.8□□□□□ -1.48
HMGN1-215ENST00000485550 C6orf99Q4VX62 202 aa5.8□□□□□ -1.48
HMGN1-215ENST00000485550 C3orf79P0CE67 100 aa5.79□□□□□ -1.48
HMGN1-215ENST00000485550 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
HMGN1-215ENST00000485550 SLC25A34Q6PIV7 304 aa5.79□□□□□ -1.48
HMGN1-215ENST00000485550 H7C2G1 150 aa5.78□□□□□ -1.48
HMGN1-215ENST00000485550 ELOF1P60002 83 aaKnown RBP5.78□□□□□ -1.48
HMGN1-215ENST00000485550 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
HMGN1-215ENST00000485550 KRTDAPP60985 99 aa5.78□□□□□ -1.48
HMGN1-215ENST00000485550 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
HMGN1-215ENST00000485550 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms