RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 C20orf203Q8NBC4 194 aa3.67□□□□□ -1.82
CHD6-209ENST00000482596 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CHD6-209ENST00000482596 ST20Q9HBF5 79 aa3.67□□□□□ -1.82
CHD6-209ENST00000482596 IGLV4-60A0A075B6I1 120 aa3.66□□□□□ -1.82
CHD6-209ENST00000482596 A0A096LNI7 61 aa3.66□□□□□ -1.82
CHD6-209ENST00000482596 ORMDL2Q53FV1 153 aa3.66□□□□□ -1.82
CHD6-209ENST00000482596 C1orf137Q5JT78 98 aa3.66□□□□□ -1.82
CHD6-209ENST00000482596 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
CHD6-209ENST00000482596 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
CHD6-209ENST00000482596 IGLV10-54A0A075B6I4 117 aa3.65□□□□□ -1.83
CHD6-209ENST00000482596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 TRBV27A0A0K0K1C4 114 aa3.65□□□□□ -1.83
CHD6-209ENST00000482596 IGKV2-29A2NJV5 120 aaPredicted RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 RPS10P46783 165 aaKnown RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 MRPL51Q4U2R6 128 aaKnown RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
CHD6-209ENST00000482596 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
CHD6-209ENST00000482596 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.64□□□□□ -1.83
CHD6-209ENST00000482596 IGKV3OR2-268A0A0C4DH90 116 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 MT-ND6P03923 174 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 IGLV7-43P04211 117 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 IFITM1P13164 125 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
CHD6-209ENST00000482596 FCER1GP30273 86 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 NMUP48645 174 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 HBBP68871 147 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 MRPL54Q6P161 138 aaKnown RBP3.64□□□□□ -1.83
CHD6-209ENST00000482596 KRTAP26-1Q6PEX3 210 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 TMEM242Q9NWH2 141 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
CHD6-209ENST00000482596 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 TRBV24-1A0A075B6N3 115 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 TRAV13-1A0A0B4J241 112 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 IFITM10A6NMD0 228 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 H3BMG7 143 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 CKS2P33552 79 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 SVBPQ8N300 66 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 C20orf78Q9BR46 151 aa3.63□□□□□ -1.83
CHD6-209ENST00000482596 A0A1B0GW54 56 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 D6R8Y8 96 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 FABP2P12104 132 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 LINC00526Q96FQ7 95 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 TIMM17AQ99595 171 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 CDC42SE2Q9NRR3 84 aa3.62□□□□□ -1.83
CHD6-209ENST00000482596 A0A087X002 238 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 COLCA2A8K830 154 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 NDUFC2-KCTD14E9PQ53 114 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 UQCRQO14949 82 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BOP23527 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BBP33778 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 CXCL5P42830 114 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BDP58876 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BCP62807 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST2H2BEQ16778 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.61□□□□□ -1.83
CHD6-209ENST00000482596 TMEM136Q6ZRR5 245 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 Q6ZUT4 128 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 TEN1Q86WV5 123 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BHQ93079 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BNQ99877 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 HIST1H2BMQ99879 126 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 SEC11CQ9BY50 192 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 UBE2D4Q9Y2X8 147 aa3.61□□□□□ -1.83
CHD6-209ENST00000482596 TMEM256-PLSCR3K7ERE1 68 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 NPYP01303 97 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 XCL1P47992 114 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 IMMP2LQ96T52 175 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 TIMM21Q9BVV7 248 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 SND1-IT1Q9HBX3 110 aa3.6□□□□□ -1.83
CHD6-209ENST00000482596 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
CHD6-209ENST00000482596 ADCYAP1P18509 176 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 UBE2BP63146 152 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 LINC01545Q5VT33 79 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 C2orf66Q6UXQ4 117 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 HIST3H2BBQ8N257 126 aa3.59□□□□□ -1.83
CHD6-209ENST00000482596 IGLV8-61A0A075B6I0 122 aa3.58□□□□□ -1.84
CHD6-209ENST00000482596 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
CHD6-209ENST00000482596 APOC3P02656 99 aa3.58□□□□□ -1.84
CHD6-209ENST00000482596 IFI27P40305 119 aaPredicted RBP3.58□□□□□ -1.84
CHD6-209ENST00000482596 RPL39P62891 51 aaKnown RBP3.58□□□□□ -1.84
CHD6-209ENST00000482596 RNASE13Q5GAN3 156 aaKnown RBP3.58□□□□□ -1.84
CHD6-209ENST00000482596 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms