RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR13C6PQ8NH95 151 aa7.59□□□□□ -1.19
PTPRF-213ENST00000481019 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
PTPRF-213ENST00000481019 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
PTPRF-213ENST00000481019 C7orf33Q8WU49 177 aa7.58□□□□□ -1.2
PTPRF-213ENST00000481019 K7ERJ3 54 aa7.57□□□□□ -1.2
PTPRF-213ENST00000481019 TAX1BP3O14907 124 aa7.57□□□□□ -1.2
PTPRF-213ENST00000481019 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
PTPRF-213ENST00000481019 PSMB2P49721 201 aa7.57□□□□□ -1.2
PTPRF-213ENST00000481019 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 VPREB1P12018 145 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 FABP2P12104 132 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
PTPRF-213ENST00000481019 SNCGO76070 127 aa7.55□□□□□ -1.2
PTPRF-213ENST00000481019 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
PTPRF-213ENST00000481019 VAMP3Q15836 100 aa7.55□□□□□ -1.2
PTPRF-213ENST00000481019 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
PTPRF-213ENST00000481019 H3BUT2 72 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 H7C2G1 150 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 TSPAN13O95857 204 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
PTPRF-213ENST00000481019 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 PSORS1C2Q9UIG4 136 aa7.54□□□□□ -1.2
PTPRF-213ENST00000481019 TRBV20-1A0A075B6N2 111 aa7.53□□□□□ -1.2
PTPRF-213ENST00000481019 H0YGX0 51 aa7.53□□□□□ -1.2
PTPRF-213ENST00000481019 NCR3O14931 201 aa7.53□□□□□ -1.2
PTPRF-213ENST00000481019 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
PTPRF-213ENST00000481019 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
PTPRF-213ENST00000481019 GTF2H5Q6ZYL4 71 aa7.52□□□□□ -1.21
PTPRF-213ENST00000481019 M0QXV9 152 aa7.51□□□□□ -1.21
PTPRF-213ENST00000481019 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
PTPRF-213ENST00000481019 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
PTPRF-213ENST00000481019 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 J3QL48 77 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 Q8NDZ9 215 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 SMIM11BQ8TCY0 68 aa7.49□□□□□ -1.21
PTPRF-213ENST00000481019 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 GAGE10A6NGK3 116 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 OXTP01178 125 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 DIRC1Q969H9 104 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 KCNQ1DNQ9H478 68 aa7.48□□□□□ -1.21
PTPRF-213ENST00000481019 A0A1B0GX51 115 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 PRYO14603 147 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 TRIAP1O43715 76 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 SPCS1Q9Y6A9 102 aa7.47□□□□□ -1.21
PTPRF-213ENST00000481019 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
PTPRF-213ENST00000481019 SLC25A20O43772 301 aa7.46□□□□□ -1.22
PTPRF-213ENST00000481019 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
PTPRF-213ENST00000481019 GHRHP01286 108 aa7.46□□□□□ -1.22
PTPRF-213ENST00000481019 UBE2BP63146 152 aa7.46□□□□□ -1.22
PTPRF-213ENST00000481019 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
PTPRF-213ENST00000481019 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
PTPRF-213ENST00000481019 A0A1B0GV90 55 aa7.44□□□□□ -1.22
PTPRF-213ENST00000481019 K7EP34 96 aa7.44□□□□□ -1.22
PTPRF-213ENST00000481019 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
PTPRF-213ENST00000481019 C6orf99Q4VX62 202 aa7.44□□□□□ -1.22
PTPRF-213ENST00000481019 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
PTPRF-213ENST00000481019 H3BQ85 93 aa7.43□□□□□ -1.22
PTPRF-213ENST00000481019 DNAL4O96015 105 aa7.43□□□□□ -1.22
PTPRF-213ENST00000481019 COX7BP24311 80 aa7.43□□□□□ -1.22
PTPRF-213ENST00000481019 ETDCA0A1B0GVM5 59 aa7.42□□□□□ -1.22
PTPRF-213ENST00000481019 UBE2V1Q13404 147 aa7.42□□□□□ -1.22
PTPRF-213ENST00000481019 REG3GQ6UW15 175 aa7.42□□□□□ -1.22
PTPRF-213ENST00000481019 LST1O00453 97 aa7.41□□□□□ -1.22
PTPRF-213ENST00000481019 TRACP01848 142 aa7.41□□□□□ -1.22
PTPRF-213ENST00000481019 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
PTPRF-213ENST00000481019 TCL1BO95988 128 aa7.4□□□□□ -1.22
PTPRF-213ENST00000481019 SPRR1AP35321 89 aa7.4□□□□□ -1.22
PTPRF-213ENST00000481019 ELOF1P60002 83 aaKnown RBP7.4□□□□□ -1.22
PTPRF-213ENST00000481019 DHRS4-AS1Q9P1J3 65 aa7.4□□□□□ -1.22
PTPRF-213ENST00000481019 hADV29S1A0JD25 119 aa7.39□□□□□ -1.23
PTPRF-213ENST00000481019 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
PTPRF-213ENST00000481019 F8W1H4 67 aa7.38□□□□□ -1.23
PTPRF-213ENST00000481019 H3BMG7 143 aa7.38□□□□□ -1.23
PTPRF-213ENST00000481019 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
PTPRF-213ENST00000481019 LINC00575Q6W349 94 aa7.38□□□□□ -1.23
PTPRF-213ENST00000481019 H0Y9J4 135 aa7.37□□□□□ -1.23
PTPRF-213ENST00000481019 CLEC2BQ92478 149 aa7.37□□□□□ -1.23
PTPRF-213ENST00000481019 BCE1O60756 84 aa7.36□□□□□ -1.23
PTPRF-213ENST00000481019 KRTAP1-4P0C5Y4 121 aa7.36□□□□□ -1.23
PTPRF-213ENST00000481019 Q6ZRX8 168 aa7.36□□□□□ -1.23
PTPRF-213ENST00000481019 B5MCH6 92 aa7.35□□□□□ -1.23
PTPRF-213ENST00000481019 ZNF861PO60384 105 aa7.35□□□□□ -1.23
PTPRF-213ENST00000481019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.35□□□□□ -1.23
PTPRF-213ENST00000481019 FAM19A1Q7Z5A9 133 aa7.35□□□□□ -1.23
PTPRF-213ENST00000481019 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
PTPRF-213ENST00000481019 C9JAW5 83 aa7.34□□□□□ -1.23
PTPRF-213ENST00000481019 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
PTPRF-213ENST00000481019 H3BT86 120 aa7.34□□□□□ -1.23
PTPRF-213ENST00000481019 TMEM256-PLSCR3K7ERE1 68 aa7.34□□□□□ -1.23
PTPRF-213ENST00000481019 UBE2AP49459 152 aa7.34□□□□□ -1.23
PTPRF-213ENST00000481019 ORMDL1Q9P0S3 153 aa7.34□□□□□ -1.23
PTPRF-213ENST00000481019 PRR26Q8N8Z3 221 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms