RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 SEC61BP60468 96 aaKnown RBP10.5□□□□□ -0.73
ABCF3-214ENST00000480562 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
ABCF3-214ENST00000480562 TRAV23DV6A0A075B6W5 121 aa10.49□□□□□ -0.73
ABCF3-214ENST00000480562 SLC25A20O43772 301 aa10.49□□□□□ -0.73
ABCF3-214ENST00000480562 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
ABCF3-214ENST00000480562 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
ABCF3-214ENST00000480562 KRTAP9-6A0A140TA67 174 aa10.47□□□□□ -0.73
ABCF3-214ENST00000480562 JOSD1Q15040 202 aaPredicted RBP10.47□□□□□ -0.73
ABCF3-214ENST00000480562 ST20-AS1Q8NBB2 130 aa10.47□□□□□ -0.73
ABCF3-214ENST00000480562 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
ABCF3-214ENST00000480562 ZNF73O43830 326 aaPredicted RBP10.46□□□□□ -0.73
ABCF3-214ENST00000480562 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
ABCF3-214ENST00000480562 E9PLD3 99 aa10.41□□□□□ -0.74
ABCF3-214ENST00000480562 XP32Q5T750 250 aa10.41□□□□□ -0.74
ABCF3-214ENST00000480562 COLCA2A8K830 154 aa10.39□□□□□ -0.75
ABCF3-214ENST00000480562 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
ABCF3-214ENST00000480562 SLC7A5P1Q8MH63 180 aa10.38□□□□□ -0.75
ABCF3-214ENST00000480562 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
ABCF3-214ENST00000480562 LINC00308Q8TCZ7 52 aa10.37□□□□□ -0.75
ABCF3-214ENST00000480562 LITAFQ99732 161 aa10.37□□□□□ -0.75
ABCF3-214ENST00000480562 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
ABCF3-214ENST00000480562 HRCT1Q6UXD1 115 aa10.36□□□□□ -0.75
ABCF3-214ENST00000480562 CBY1Q9Y3M2 126 aa10.36□□□□□ -0.75
ABCF3-214ENST00000480562 SPANXCQ9NY87 97 aa10.35□□□□□ -0.75
ABCF3-214ENST00000480562 SYS1-DBNDD2H3BUS1 97 aa10.34□□□□□ -0.75
ABCF3-214ENST00000480562 SPRR1BP22528 89 aa10.34□□□□□ -0.75
ABCF3-214ENST00000480562 DHRS4-AS1Q9P1J3 65 aa10.32□□□□□ -0.76
ABCF3-214ENST00000480562 TIMM17BO60830 172 aa10.31□□□□□ -0.76
ABCF3-214ENST00000480562 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
ABCF3-214ENST00000480562 SLC25A34Q6PIV7 304 aa10.3□□□□□ -0.76
ABCF3-214ENST00000480562 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
ABCF3-214ENST00000480562 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
ABCF3-214ENST00000480562 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
ABCF3-214ENST00000480562 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
ABCF3-214ENST00000480562 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
ABCF3-214ENST00000480562 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
ABCF3-214ENST00000480562 COX7BP24311 80 aa10.28□□□□□ -0.76
ABCF3-214ENST00000480562 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
ABCF3-214ENST00000480562 ELOF1P60002 83 aaKnown RBP10.27□□□□□ -0.77
ABCF3-214ENST00000480562 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
ABCF3-214ENST00000480562 PCOTHQ58A44 107 aa10.27□□□□□ -0.77
ABCF3-214ENST00000480562 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
ABCF3-214ENST00000480562 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BKO60814 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BJP06899 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BOP23527 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BBP33778 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BDP58876 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BCP62807 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 TAL2Q16559 108 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST2H2BEQ16778 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 Q1RN00 199 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BHQ93079 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BNQ99877 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 HIST1H2BMQ99879 126 aa10.26□□□□□ -0.77
ABCF3-214ENST00000480562 PET117Q6UWS5 81 aa10.25□□□□□ -0.77
ABCF3-214ENST00000480562 KRTAP19-2Q3LHN2 52 aa10.24□□□□□ -0.77
ABCF3-214ENST00000480562 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
ABCF3-214ENST00000480562 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
ABCF3-214ENST00000480562 H7C2G1 150 aa10.22□□□□□ -0.77
ABCF3-214ENST00000480562 PRO1933Q9H354 126 aa10.21□□□□□ -0.77
ABCF3-214ENST00000480562 TEX49A0A1B0GTD5 131 aa10.2□□□□□ -0.78
ABCF3-214ENST00000480562 C3orf79P0CE67 100 aa10.2□□□□□ -0.78
ABCF3-214ENST00000480562 CD164Q04900 197 aa10.2□□□□□ -0.78
ABCF3-214ENST00000480562 A0A0G2JQZ4 141 aa10.18□□□□□ -0.78
ABCF3-214ENST00000480562 SMIM29Q86T20 159 aa10.18□□□□□ -0.78
ABCF3-214ENST00000480562 TRBV7-6A0A0J9YX20 115 aa10.17□□□□□ -0.78
ABCF3-214ENST00000480562 MT1HP80294 61 aa10.17□□□□□ -0.78
ABCF3-214ENST00000480562 SCGB1D4Q6XE38 83 aa10.17□□□□□ -0.78
ABCF3-214ENST00000480562 KRTDAPP60985 99 aa10.16□□□□□ -0.78
ABCF3-214ENST00000480562 FSIP2Q5CZC0 6907 aa10.16□□□□□ -0.78
ABCF3-214ENST00000480562 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
ABCF3-214ENST00000480562 A6NDN8 102 aa10.15□□□□□ -0.78
ABCF3-214ENST00000480562 AKR1D1P51857 326 aa10.15□□□□□ -0.78
ABCF3-214ENST00000480562 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
ABCF3-214ENST00000480562 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
ABCF3-214ENST00000480562 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
ABCF3-214ENST00000480562 Q5XG85 94 aa10.13□□□□□ -0.79
ABCF3-214ENST00000480562 CRCT1Q9UGL9 99 aa10.12□□□□□ -0.79
ABCF3-214ENST00000480562 IFITM1P13164 125 aa10.11□□□□□ -0.79
ABCF3-214ENST00000480562 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
ABCF3-214ENST00000480562 COA6Q5JTJ3 125 aaKnown RBP10.1□□□□□ -0.79
ABCF3-214ENST00000480562 ATOH7Q8N100 152 aa10.1□□□□□ -0.79
ABCF3-214ENST00000480562 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
ABCF3-214ENST00000480562 C20orf202A1L168 122 aa10.09□□□□□ -0.79
ABCF3-214ENST00000480562 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
ABCF3-214ENST00000480562 Q6ZVH6 145 aa10.07□□□□□ -0.8
ABCF3-214ENST00000480562 A4D1N5 150 aa10.06□□□□□ -0.8
ABCF3-214ENST00000480562 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
ABCF3-214ENST00000480562 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
ABCF3-214ENST00000480562 SMIM11BQ8TCY0 68 aa10.06□□□□□ -0.8
ABCF3-214ENST00000480562 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
ABCF3-214ENST00000480562 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
ABCF3-214ENST00000480562 TCL1BO95988 128 aa10.01□□□□□ -0.81
ABCF3-214ENST00000480562 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
ABCF3-214ENST00000480562 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
ABCF3-214ENST00000480562 FLGP20930 4061 aaPredicted RBP9.99□□□□□ -0.81
ABCF3-214ENST00000480562 F8WEM9 126 aa9.98□□□□□ -0.81
ABCF3-214ENST00000480562 M0R2T5 61 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms