RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 SNAPINO95295 136 aa4.22□□□□□ -1.73
SSR1-206ENST00000479365 COX17Q14061 63 aa4.22□□□□□ -1.73
SSR1-206ENST00000479365 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
SSR1-206ENST00000479365 SVBPQ8N300 66 aa4.22□□□□□ -1.73
SSR1-206ENST00000479365 TRAV12-1A0A0B4J245 112 aa4.21□□□□□ -1.74
SSR1-206ENST00000479365 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
SSR1-206ENST00000479365 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
SSR1-206ENST00000479365 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
SSR1-206ENST00000479365 CHCHD1Q96BP2 118 aaKnown RBP4.21□□□□□ -1.74
SSR1-206ENST00000479365 SMIM13P0DJ93 91 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 LINC00158P58513 81 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 CXCL6P80162 114 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 PLEKHB2Q96CS7 222 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
SSR1-206ENST00000479365 SFTA2Q6UW10 78 aa4.19□□□□□ -1.74
SSR1-206ENST00000479365 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
SSR1-206ENST00000479365 LINC00304Q8N9R0 145 aa4.19□□□□□ -1.74
SSR1-206ENST00000479365 TSPEAR-AS2P59090 65 aa4.18□□□□□ -1.74
SSR1-206ENST00000479365 MIR7-3HGQ8N6C7 128 aa4.18□□□□□ -1.74
SSR1-206ENST00000479365 HIGD2AQ9BW72 106 aa4.18□□□□□ -1.74
SSR1-206ENST00000479365 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
SSR1-206ENST00000479365 NCR3O14931 201 aa4.17□□□□□ -1.74
SSR1-206ENST00000479365 TRGC2P03986 189 aa4.17□□□□□ -1.74
SSR1-206ENST00000479365 BOD1L2Q8IYS8 172 aa4.17□□□□□ -1.74
SSR1-206ENST00000479365 SPRR4Q96PI1 79 aa4.17□□□□□ -1.74
SSR1-206ENST00000479365 IGLV8-61A0A075B6I0 122 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
SSR1-206ENST00000479365 SERF1AO75920 110 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 SPRR1AP35321 89 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 NDUFA12Q9UI09 145 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 V9GYY9 64 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
SSR1-206ENST00000479365 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
SSR1-206ENST00000479365 DAND5Q8N907 189 aa4.15□□□□□ -1.75
SSR1-206ENST00000479365 SMCR5Q8TEV8 140 aa4.15□□□□□ -1.75
SSR1-206ENST00000479365 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
SSR1-206ENST00000479365 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.75
SSR1-206ENST00000479365 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
SSR1-206ENST00000479365 LEPROTO15243 131 aa4.14□□□□□ -1.75
SSR1-206ENST00000479365 LEPROTL1O95214 131 aa4.14□□□□□ -1.75
SSR1-206ENST00000479365 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
SSR1-206ENST00000479365 LOC107984156A0A0G2JMH3 177 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 COLCA2A8K830 154 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 FABP4P15090 132 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 ARL17AQ8IVW1 177 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 SLC7A5P1Q8MH63 180 aa4.13□□□□□ -1.75
SSR1-206ENST00000479365 ETDCA0A1B0GVM5 59 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 A6NDN8 102 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 J3QQQ9 107 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 PLNP26678 52 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 CTAG1AP78358 180 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
SSR1-206ENST00000479365 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
SSR1-206ENST00000479365 LINC00587B1AMM8 73 aa4.11□□□□□ -1.75
SSR1-206ENST00000479365 DPM2O94777 84 aa4.11□□□□□ -1.75
SSR1-206ENST00000479365 SOSTDC1Q6X4U4 206 aa4.11□□□□□ -1.75
SSR1-206ENST00000479365 Q9BRP9 147 aa4.11□□□□□ -1.75
SSR1-206ENST00000479365 IGKCP01834 107 aa4.1□□□□□ -1.75
SSR1-206ENST00000479365 DDTP30046 118 aa4.1□□□□□ -1.75
SSR1-206ENST00000479365 SPAG11AQ6PDA7 123 aa4.1□□□□□ -1.75
SSR1-206ENST00000479365 HSPB8Q9UJY1 196 aa4.1□□□□□ -1.75
SSR1-206ENST00000479365 A0A0J9YXY3 114 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 TRBV10-2A0A0K0K1G8 114 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 IGLV6-57P01721 117 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 S100A6P06703 90 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.75
SSR1-206ENST00000479365 NMUP48645 174 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 HERVK_113P61574 105 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 NPC2P61916 151 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 TAL2Q16559 108 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 Q6ZRX8 168 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
SSR1-206ENST00000479365 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.75
SSR1-206ENST00000479365 A0A0U1RQV1 116 aa4.08□□□□□ -1.76
SSR1-206ENST00000479365 NDUFC2O95298 119 aa4.08□□□□□ -1.76
SSR1-206ENST00000479365 MOBPQ13875 183 aa4.08□□□□□ -1.76
SSR1-206ENST00000479365 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
SSR1-206ENST00000479365 TRAV23DV6A0A075B6W5 121 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 SYS1-DBNDD2H3BUS1 97 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BKO60814 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 SPINK1P00995 79 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BJP06899 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BOP23527 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BBP33778 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BDP58876 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BCP62807 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST2H2BEQ16778 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 Q1RN00 199 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BHQ93079 126 aa4.07□□□□□ -1.76
SSR1-206ENST00000479365 HIST1H2BNQ99877 126 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms