RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LRP2P98164 4655 aa9.17□□□□□ -0.94
HMGA1-206ENST00000478214 B5MCH6 92 aa9.16□□□□□ -0.94
HMGA1-206ENST00000478214 SMCR5Q8TEV8 140 aa9.16□□□□□ -0.94
HMGA1-206ENST00000478214 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
HMGA1-206ENST00000478214 TRAV23DV6A0A075B6W5 121 aa9.14□□□□□ -0.95
HMGA1-206ENST00000478214 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
HMGA1-206ENST00000478214 TSPAN13O95857 204 aa9.13□□□□□ -0.95
HMGA1-206ENST00000478214 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
HMGA1-206ENST00000478214 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
HMGA1-206ENST00000478214 C3orf22Q8N5N4 141 aa9.12□□□□□ -0.95
HMGA1-206ENST00000478214 OR13C6PQ8NH95 151 aa9.12□□□□□ -0.95
HMGA1-206ENST00000478214 ZNF73O43830 326 aaPredicted RBP9.11□□□□□ -0.95
HMGA1-206ENST00000478214 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
HMGA1-206ENST00000478214 Q6ZRX8 168 aa9.11□□□□□ -0.95
HMGA1-206ENST00000478214 Q9BRP9 147 aa9.11□□□□□ -0.95
HMGA1-206ENST00000478214 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
HMGA1-206ENST00000478214 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
HMGA1-206ENST00000478214 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
HMGA1-206ENST00000478214 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 IFITM1P13164 125 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 Q6ZVH6 145 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
HMGA1-206ENST00000478214 LPAP08519 4548 aa9.07□□□□□ -0.96
HMGA1-206ENST00000478214 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
HMGA1-206ENST00000478214 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
HMGA1-206ENST00000478214 JOSD1Q15040 202 aaPredicted RBP9.06□□□□□ -0.96
HMGA1-206ENST00000478214 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
HMGA1-206ENST00000478214 HINT1P49773 126 aaPredicted RBP9.05□□□□□ -0.96
HMGA1-206ENST00000478214 PRR4Q16378 134 aa9.05□□□□□ -0.96
HMGA1-206ENST00000478214 A6NDN8 102 aa9.01□□□□□ -0.97
HMGA1-206ENST00000478214 C6orf99Q4VX62 202 aa9.01□□□□□ -0.97
HMGA1-206ENST00000478214 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
HMGA1-206ENST00000478214 COX7BP24311 80 aa9□□□□□ -0.97
HMGA1-206ENST00000478214 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
HMGA1-206ENST00000478214 Q8NBF4 154 aa8.99□□□□□ -0.97
HMGA1-206ENST00000478214 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
HMGA1-206ENST00000478214 RETNLBQ9BQ08 111 aa8.98□□□□□ -0.97
HMGA1-206ENST00000478214 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
HMGA1-206ENST00000478214 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
HMGA1-206ENST00000478214 COX8AP10176 69 aa8.97□□□□□ -0.97
HMGA1-206ENST00000478214 MOBPQ13875 183 aa8.97□□□□□ -0.97
HMGA1-206ENST00000478214 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
HMGA1-206ENST00000478214 CTAG1AP78358 180 aa8.96□□□□□ -0.98
HMGA1-206ENST00000478214 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
HMGA1-206ENST00000478214 RNF213Q63HN8 5207 aa8.96□□□□□ -0.98
HMGA1-206ENST00000478214 TRBV7-6A0A0J9YX20 115 aa8.95□□□□□ -0.98
HMGA1-206ENST00000478214 A4D1N5 150 aa8.95□□□□□ -0.98
HMGA1-206ENST00000478214 PAM16Q9Y3D7 125 aa8.95□□□□□ -0.98
HMGA1-206ENST00000478214 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
HMGA1-206ENST00000478214 SMIM11BQ8TCY0 68 aa8.94□□□□□ -0.98
HMGA1-206ENST00000478214 C14orf144Q96I85 54 aa8.94□□□□□ -0.98
HMGA1-206ENST00000478214 A0A1B0GWB2 263 aa8.93□□□□□ -0.98
HMGA1-206ENST00000478214 DLEU1O43261 78 aa8.93□□□□□ -0.98
HMGA1-206ENST00000478214 SPATA45Q537H7 98 aa8.93□□□□□ -0.98
HMGA1-206ENST00000478214 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
HMGA1-206ENST00000478214 SPRR1BP22528 89 aa8.92□□□□□ -0.98
HMGA1-206ENST00000478214 C9orf153Q5TBE3 101 aa8.91□□□□□ -0.98
HMGA1-206ENST00000478214 VAMP8Q9BV40 100 aa8.91□□□□□ -0.98
HMGA1-206ENST00000478214 SPINK1P00995 79 aa8.9□□□□□ -0.98
HMGA1-206ENST00000478214 TAL2Q16559 108 aa8.89□□□□□ -0.99
HMGA1-206ENST00000478214 DEFB105AQ8NG35 78 aa8.89□□□□□ -0.99
HMGA1-206ENST00000478214 C12orf57Q99622 126 aa8.89□□□□□ -0.99
HMGA1-206ENST00000478214 TMA7Q9Y2S6 64 aaKnown RBP8.89□□□□□ -0.99
HMGA1-206ENST00000478214 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
HMGA1-206ENST00000478214 SLC25A34Q6PIV7 304 aa8.87□□□□□ -0.99
HMGA1-206ENST00000478214 C2orf91Q6ZV80 131 aa8.86□□□□□ -0.99
HMGA1-206ENST00000478214 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
HMGA1-206ENST00000478214 LAMTOR3Q9UHA4 124 aa8.86□□□□□ -0.99
HMGA1-206ENST00000478214 TEX49A0A1B0GTD5 131 aa8.85□□□□□ -0.99
HMGA1-206ENST00000478214 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
HMGA1-206ENST00000478214 Q1RN00 199 aa8.85□□□□□ -0.99
HMGA1-206ENST00000478214 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
HMGA1-206ENST00000478214 VAMP3Q15836 100 aa8.84□□□□□ -0.99
HMGA1-206ENST00000478214 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
HMGA1-206ENST00000478214 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
HMGA1-206ENST00000478214 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
HMGA1-206ENST00000478214 CFC1BP0CG36 223 aa8.82□□□□□ -1
HMGA1-206ENST00000478214 CFC1P0CG37 223 aa8.82□□□□□ -1
HMGA1-206ENST00000478214 LINC00575Q6W349 94 aa8.82□□□□□ -1
HMGA1-206ENST00000478214 SMIM29Q86T20 159 aa8.82□□□□□ -1
HMGA1-206ENST00000478214 Q8N377 158 aa8.82□□□□□ -1
HMGA1-206ENST00000478214 SLC25A20O43772 301 aa8.81□□□□□ -1
HMGA1-206ENST00000478214 TPRXLQ17RH7 258 aa8.81□□□□□ -1
HMGA1-206ENST00000478214 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
HMGA1-206ENST00000478214 H7C2G1 150 aa8.79□□□□□ -1
HMGA1-206ENST00000478214 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
HMGA1-206ENST00000478214 hADV29S1A0JD25 119 aa8.78□□□□□ -1
HMGA1-206ENST00000478214 RAB37Q96AX2 223 aa8.78□□□□□ -1
HMGA1-206ENST00000478214 CDIP1Q9H305 208 aa8.78□□□□□ -1
HMGA1-206ENST00000478214 CEND1Q8N111 149 aa8.77□□□□□ -1.01
HMGA1-206ENST00000478214 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
HMGA1-206ENST00000478214 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
HMGA1-206ENST00000478214 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
HMGA1-206ENST00000478214 Q6ZQY7 126 aa8.76□□□□□ -1.01
HMGA1-206ENST00000478214 MUC2Q02817 5179 aa8.75□□□□□ -1.01
HMGA1-206ENST00000478214 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
HMGA1-206ENST00000478214 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
HMGA1-206ENST00000478214 FXYD2P54710 66 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms