RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MRPL34Q9BQ48 92 aaKnown RBP3.04□□□□□ -1.92
CCNL1-215ENST00000474539 TSPEAR-AS2P59090 65 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 ADAMTSL4-AS1Q5T5F5 129 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-215ENST00000474539 Q96NJ1 140 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 WNK1Q9H4A3 2382 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 URB1-AS1Q96HZ7 61 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 SPRR4Q96PI1 79 aa3.03□□□□□ -1.92
CCNL1-215ENST00000474539 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.93
CCNL1-215ENST00000474539 A0A096LNJ9 63 aa3.03□□□□□ -1.93
CCNL1-215ENST00000474539 IGKV2D-30A0A075B6S6 120 aa3.02□□□□□ -1.93
CCNL1-215ENST00000474539 IGKV2-30P06310 120 aa3.02□□□□□ -1.93
CCNL1-215ENST00000474539 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
CCNL1-215ENST00000474539 FREM2Q5SZK8 3169 aa3.02□□□□□ -1.93
CCNL1-215ENST00000474539 SMG1Q96Q15 3661 aaKnown RBP3.02□□□□□ -1.93
CCNL1-215ENST00000474539 ARHGAP32A7KAX9 2087 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 SMIM26A0A096LP01 95 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 Q8N3U1 123 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 ANKRD11Q6UB99 2663 aaPredicted RBP3.01□□□□□ -1.93
CCNL1-215ENST00000474539 AGRNO00468 2067 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 PKD1L2Q7Z442 2459 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 PRR3P79522 188 aaKnown RBP3.01□□□□□ -1.93
CCNL1-215ENST00000474539 CELSR3Q9NYQ7 3312 aa3.01□□□□□ -1.93
CCNL1-215ENST00000474539 F8P00451 2351 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 ANKRD17O75179 2603 aaKnown RBP3□□□□□ -1.93
CCNL1-215ENST00000474539 A0A1B0GVX0 72 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 Q6ZSA8 131 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 MYO18BQ8IUG5 2567 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 MT-ATP8P03928 68 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 CHTF8P0CG12 524 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 A8MUN3 132 aa3□□□□□ -1.93
CCNL1-215ENST00000474539 Q6ZQT0 140 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 TNP2Q05952 138 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 ABCA12Q86UK0 2595 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 A6NED7 52 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 LINC00846Q9NV44 126 aa2.99□□□□□ -1.93
CCNL1-215ENST00000474539 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
CCNL1-215ENST00000474539 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
CCNL1-215ENST00000474539 HRES1P13985 223 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 DMXL1Q9Y485 3027 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 SERTAD4-AS1Q5TG53 156 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 A0A1B0GU69 56 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 LINC00310P59036 64 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 MYO9AB2RTY4 2548 aa2.97□□□□□ -1.93
CCNL1-215ENST00000474539 JMJD1CQ15652 2540 aa2.96□□□□□ -1.93
CCNL1-215ENST00000474539 RPS29P62273 56 aaKnown RBP2.96□□□□□ -1.93
CCNL1-215ENST00000474539 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.93
CCNL1-215ENST00000474539 C1orf195Q5TG92 126 aa2.96□□□□□ -1.93
CCNL1-215ENST00000474539 RELNP78509 3460 aa2.96□□□□□ -1.94
CCNL1-215ENST00000474539 PLXNB1O43157 2135 aa2.96□□□□□ -1.94
CCNL1-215ENST00000474539 FASNP49327 2511 aaKnown RBP2.96□□□□□ -1.94
CCNL1-215ENST00000474539 MTORP42345 2549 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
CCNL1-215ENST00000474539 IGFL1Q6UW32 110 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 Q5VSD8 79 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 K7EQZ3 153 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 PCOTHQ58A44 107 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 PIEZO2Q9H5I5 2752 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 USP9XQ93008 2570 aaPredicted RBP2.95□□□□□ -1.94
CCNL1-215ENST00000474539 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
CCNL1-215ENST00000474539 SPRR1BP22528 89 aa2.94□□□□□ -1.94
CCNL1-215ENST00000474539 SOSTDC1Q6X4U4 206 aa2.94□□□□□ -1.94
CCNL1-215ENST00000474539 MUC4Q99102 2169 aa2.94□□□□□ -1.94
CCNL1-215ENST00000474539 IGLV5-48A0A075B6I7 105 aa2.94□□□□□ -1.94
CCNL1-215ENST00000474539 SMIM29Q86T20 159 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 Q6ZR54 194 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 VPS13CQ709C8 3753 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 FN1P02751 2386 aaKnown RBP2.93□□□□□ -1.94
CCNL1-215ENST00000474539 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 A0A1W2PNN7 141 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 LITAFQ99732 161 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 RETNLBQ9BQ08 111 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
CCNL1-215ENST00000474539 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
CCNL1-215ENST00000474539 Q9UF83 564 aa2.92□□□□□ -1.94
CCNL1-215ENST00000474539 CEP295Q9C0D2 2601 aa2.92□□□□□ -1.94
CCNL1-215ENST00000474539 SPTBN4Q9H254 2564 aa2.92□□□□□ -1.94
CCNL1-215ENST00000474539 Q8N377 158 aa2.91□□□□□ -1.94
CCNL1-215ENST00000474539 OBSCN-AS1Q96MR7 158 aa2.91□□□□□ -1.94
CCNL1-215ENST00000474539 FRYQ5TBA9 3013 aa2.91□□□□□ -1.94
CCNL1-215ENST00000474539 DSCR10P59022 87 aa2.9□□□□□ -1.94
CCNL1-215ENST00000474539 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.94
CCNL1-215ENST00000474539 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 SPRR1AP35321 89 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 DSCAML1Q8TD84 2053 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 M0R2T5 61 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 SPANXA2-OT1Q8N9U9 137 aa2.9□□□□□ -1.95
CCNL1-215ENST00000474539 SVIPQ8NHG7 77 aa2.89□□□□□ -1.95
CCNL1-215ENST00000474539 MPLKIPQ8TAP9 179 aa2.89□□□□□ -1.95
CCNL1-215ENST00000474539 CSMD2Q7Z408 3487 aa2.89□□□□□ -1.95
CCNL1-215ENST00000474539 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
CCNL1-215ENST00000474539 CR1P17927 2039 aa2.89□□□□□ -1.95
CCNL1-215ENST00000474539 USP9YO00507 2555 aaPredicted RBP2.89□□□□□ -1.95
CCNL1-215ENST00000474539 EPG5Q9HCE0 2579 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms