RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
ECHDC1-214ENST00000474289 DEFB105AQ8NG35 78 aa12.23□□□□□ -0.45
ECHDC1-214ENST00000474289 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
ECHDC1-214ENST00000474289 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
ECHDC1-214ENST00000474289 Q8N377 158 aa12.22□□□□□ -0.45
ECHDC1-214ENST00000474289 HTN3P15516 51 aa12.21□□□□□ -0.45
ECHDC1-214ENST00000474289 EGFEM1PQ0D2K5 195 aa12.21□□□□□ -0.45
ECHDC1-214ENST00000474289 Q6ZRU5 148 aa12.21□□□□□ -0.45
ECHDC1-214ENST00000474289 IGLV5-48A0A075B6I7 105 aa12.21□□□□□ -0.46
ECHDC1-214ENST00000474289 PRR15Q8IV56 129 aa12.21□□□□□ -0.46
ECHDC1-214ENST00000474289 Q1T7F1 81 aa12.2□□□□□ -0.46
ECHDC1-214ENST00000474289 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
ECHDC1-214ENST00000474289 ZCCHC13Q8WW36 166 aaKnown RBP12.19□□□□□ -0.46
ECHDC1-214ENST00000474289 PDZD2O15018 2839 aa12.18□□□□□ -0.46
ECHDC1-214ENST00000474289 A0A1W2PNM2 257 aa12.17□□□□□ -0.46
ECHDC1-214ENST00000474289 TENM4Q6N022 2769 aa12.14□□□□□ -0.47
ECHDC1-214ENST00000474289 PSPHP1O15172 72 aa12.13□□□□□ -0.47
ECHDC1-214ENST00000474289 C15orf56Q8N910 161 aa12.13□□□□□ -0.47
ECHDC1-214ENST00000474289 ETDCA0A1B0GVM5 59 aa12.12□□□□□ -0.47
ECHDC1-214ENST00000474289 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
ECHDC1-214ENST00000474289 Q8NAQ8 132 aa12.12□□□□□ -0.47
ECHDC1-214ENST00000474289 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
ECHDC1-214ENST00000474289 A0A1B0GW54 56 aa12.12□□□□□ -0.47
ECHDC1-214ENST00000474289 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-214ENST00000474289 DSCR10P59022 87 aa12.11□□□□□ -0.47
ECHDC1-214ENST00000474289 PMAIP1Q13794 54 aa12.11□□□□□ -0.47
ECHDC1-214ENST00000474289 TRAV22A0A0B4J277 110 aa12.1□□□□□ -0.47
ECHDC1-214ENST00000474289 K7EQZ3 153 aa12.1□□□□□ -0.47
ECHDC1-214ENST00000474289 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
ECHDC1-214ENST00000474289 C1orf137Q5JT78 98 aa12.1□□□□□ -0.47
ECHDC1-214ENST00000474289 PRR4Q16378 134 aa12.09□□□□□ -0.47
ECHDC1-214ENST00000474289 TNP2Q05952 138 aa12.09□□□□□ -0.47
ECHDC1-214ENST00000474289 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
ECHDC1-214ENST00000474289 Q8NBF4 154 aa12.09□□□□□ -0.47
ECHDC1-214ENST00000474289 SPART-AS1P0CW21 52 aa12.08□□□□□ -0.48
ECHDC1-214ENST00000474289 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
ECHDC1-214ENST00000474289 NKAPP1Q8N9T2 125 aa12.08□□□□□ -0.48
ECHDC1-214ENST00000474289 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
ECHDC1-214ENST00000474289 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
ECHDC1-214ENST00000474289 SERTAD4-AS1Q5TG53 156 aa12.07□□□□□ -0.48
ECHDC1-214ENST00000474289 CYP4F30PQ9H0H9 118 aa12.07□□□□□ -0.48
ECHDC1-214ENST00000474289 SMR3AQ99954 134 aa12.07□□□□□ -0.48
ECHDC1-214ENST00000474289 APOC4P55056 127 aa12.06□□□□□ -0.48
ECHDC1-214ENST00000474289 Q9BRP9 147 aa12.06□□□□□ -0.48
ECHDC1-214ENST00000474289 SPRR4Q96PI1 79 aa12.05□□□□□ -0.48
ECHDC1-214ENST00000474289 HIVEP1P15822 2718 aa12.05□□□□□ -0.48
ECHDC1-214ENST00000474289 Q6ZRX8 168 aa12.04□□□□□ -0.48
ECHDC1-214ENST00000474289 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
ECHDC1-214ENST00000474289 PSCAO43653 123 aa12.03□□□□□ -0.48
ECHDC1-214ENST00000474289 TENM1Q9UKZ4 2725 aa12.01□□□□□ -0.49
ECHDC1-214ENST00000474289 HCG22E2RYF7 251 aa12.01□□□□□ -0.49
ECHDC1-214ENST00000474289 PRB2P02812 416 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-214ENST00000474289 RPL37AP8A6NKH3 93 aa12□□□□□ -0.49
ECHDC1-214ENST00000474289 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
ECHDC1-214ENST00000474289 A8MUN3 132 aa11.99□□□□□ -0.49
ECHDC1-214ENST00000474289 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
ECHDC1-214ENST00000474289 PKD1L1Q8TDX9 2849 aa11.96□□□□□ -0.49
ECHDC1-214ENST00000474289 NDUFB1O75438 58 aa11.96□□□□□ -0.49
ECHDC1-214ENST00000474289 A8MU10 97 aa11.96□□□□□ -0.5
ECHDC1-214ENST00000474289 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
ECHDC1-214ENST00000474289 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
ECHDC1-214ENST00000474289 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
ECHDC1-214ENST00000474289 SPRR1AP35321 89 aa11.93□□□□□ -0.5
ECHDC1-214ENST00000474289 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
ECHDC1-214ENST00000474289 Q5VV11 94 aa11.92□□□□□ -0.5
ECHDC1-214ENST00000474289 DEFB116Q30KQ4 102 aa11.91□□□□□ -0.5
ECHDC1-214ENST00000474289 WFDC13Q8IUB5 93 aa11.91□□□□□ -0.5
ECHDC1-214ENST00000474289 B9D2Q9BPU9 175 aa11.9□□□□□ -0.5
ECHDC1-214ENST00000474289 F8P00451 2351 aa11.9□□□□□ -0.5
ECHDC1-214ENST00000474289 A0A0G2JQZ4 141 aa11.9□□□□□ -0.5
ECHDC1-214ENST00000474289 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
ECHDC1-214ENST00000474289 MP68P56378 58 aa11.9□□□□□ -0.5
ECHDC1-214ENST00000474289 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
ECHDC1-214ENST00000474289 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
ECHDC1-214ENST00000474289 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
ECHDC1-214ENST00000474289 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
ECHDC1-214ENST00000474289 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
ECHDC1-214ENST00000474289 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
ECHDC1-214ENST00000474289 UBE2BP63146 152 aa11.86□□□□□ -0.51
ECHDC1-214ENST00000474289 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
ECHDC1-214ENST00000474289 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
ECHDC1-214ENST00000474289 H3BNG1 76 aa11.85□□□□□ -0.51
ECHDC1-214ENST00000474289 Q8N9P0 234 aaPredicted RBP11.84□□□□□ -0.51
ECHDC1-214ENST00000474289 RETNQ9HD89 108 aa11.84□□□□□ -0.51
ECHDC1-214ENST00000474289 ATRQ13535 2644 aa11.83□□□□□ -0.52
ECHDC1-214ENST00000474289 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
ECHDC1-214ENST00000474289 LINC01556Q5JQF7 62 aa11.82□□□□□ -0.52
ECHDC1-214ENST00000474289 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
ECHDC1-214ENST00000474289 CHKB-CPT1BH3BT56 60 aa11.81□□□□□ -0.52
ECHDC1-214ENST00000474289 OTOGQ6ZRI0 2925 aa11.81□□□□□ -0.52
ECHDC1-214ENST00000474289 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
ECHDC1-214ENST00000474289 CD164Q04900 197 aa11.8□□□□□ -0.52
ECHDC1-214ENST00000474289 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
ECHDC1-214ENST00000474289 RPL37AP61513 92 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-214ENST00000474289 A0A087WSZ3 146 aa11.79□□□□□ -0.52
ECHDC1-214ENST00000474289 UBE2AP49459 152 aa11.79□□□□□ -0.52
ECHDC1-214ENST00000474289 MRPL55Q7Z7F7 128 aaKnown RBP11.79□□□□□ -0.52
ECHDC1-214ENST00000474289 LIMD2Q9BT23 127 aa11.79□□□□□ -0.52
ECHDC1-214ENST00000474289 TEP1Q99973 2627 aaKnown RBP11.79□□□□□ -0.52
ECHDC1-214ENST00000474289 C16orf90A8MZG2 172 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms