RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 COX8AP10176 69 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 MDKP21741 143 aaPredicted RBP3.49□□□□□ -1.85
RTF1-203ENST00000473214 DEFB134Q4QY38 66 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 NDUFA4L2Q9NRX3 87 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 TMEM14BQ9NUH8 114 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 PSENENQ9NZ42 101 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
RTF1-203ENST00000473214 TRBV6-7A0A0A0MS04 114 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 CEBPZOSA8MTT3 80 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 HMGN4O00479 90 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 HRES1P13985 223 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
RTF1-203ENST00000473214 PLGLAQ15195 96 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 CADP27708 2225 aa3.48□□□□□ -1.85
RTF1-203ENST00000473214 TRBV6-8A0A0A6YYG3 113 aa3.47□□□□□ -1.85
RTF1-203ENST00000473214 HILPDAQ9Y5L2 63 aa3.47□□□□□ -1.85
RTF1-203ENST00000473214 V9GYH0 126 aa3.47□□□□□ -1.85
RTF1-203ENST00000473214 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
RTF1-203ENST00000473214 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 PPP1R17O96001 155 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 GCHFRP30047 84 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 SSBP1Q04837 148 aaKnown RBP3.46□□□□□ -1.86
RTF1-203ENST00000473214 XAF1Q6GPH4 301 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 LENEPQ9Y5L5 61 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 TENM2Q9NT68 2774 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 SACSQ9NZJ4 4579 aa3.46□□□□□ -1.86
RTF1-203ENST00000473214 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
RTF1-203ENST00000473214 A0A0J9YY99 117 aa3.45□□□□□ -1.86
RTF1-203ENST00000473214 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
RTF1-203ENST00000473214 ARL2-SNX15V9GYD0 113 aa3.45□□□□□ -1.86
RTF1-203ENST00000473214 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
RTF1-203ENST00000473214 HERC2O95714 4834 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 TENM3Q9P273 2699 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 IGLV3-32A0A0A0MS00 114 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 LOC101927531A0A1B0GV80 90 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 CLPSL1A2RUU4 121 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 SAA2P0DJI9 122 aaPredicted RBP3.44□□□□□ -1.86
RTF1-203ENST00000473214 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 MRGPRG-AS1Q2M3A8 158 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 SPAG11AQ6PDA7 123 aa3.44□□□□□ -1.86
RTF1-203ENST00000473214 PIN1P1O15428 100 aa3.43□□□□□ -1.86
RTF1-203ENST00000473214 PRR34Q9NV39 138 aa3.43□□□□□ -1.86
RTF1-203ENST00000473214 ARHGAP32A7KAX9 2087 aa3.43□□□□□ -1.86
RTF1-203ENST00000473214 PLCE1Q9P212 2302 aa3.43□□□□□ -1.86
RTF1-203ENST00000473214 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 ARFGEF3Q5TH69 2177 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 H3BVH4 76 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 PPYP01298 95 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 IGHV3-30P01768 117 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 IGHV3-30-5P0DP03 117 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 Q6JHZ5 121 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 GNG13Q9P2W3 67 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 DNAH1Q9P2D7 4330 aa3.42□□□□□ -1.86
RTF1-203ENST00000473214 DNAH3Q8TD57 4116 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 LYNX1G3V0Z9 82 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 DNAL4O96015 105 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 LYNX1P0DP58 116 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 BAGE3Q86Y29 109 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 BAGE2Q86Y30 109 aa3.41□□□□□ -1.86
RTF1-203ENST00000473214 D6R8Y8 96 aa3.4□□□□□ -1.87
RTF1-203ENST00000473214 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
RTF1-203ENST00000473214 PRR15LQ9BU68 103 aa3.4□□□□□ -1.87
RTF1-203ENST00000473214 RYR1P21817 5038 aa3.39□□□□□ -1.87
RTF1-203ENST00000473214 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
RTF1-203ENST00000473214 TRBV6-4A0A1B0GX49 114 aa3.39□□□□□ -1.87
RTF1-203ENST00000473214 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
RTF1-203ENST00000473214 IFI27P40305 119 aaPredicted RBP3.39□□□□□ -1.87
RTF1-203ENST00000473214 DSCR10P59022 87 aa3.38□□□□□ -1.87
RTF1-203ENST00000473214 Q86TA4 180 aa3.38□□□□□ -1.87
RTF1-203ENST00000473214 Q8N9L7 120 aa3.38□□□□□ -1.87
RTF1-203ENST00000473214 COX7B2Q8TF08 81 aa3.38□□□□□ -1.87
RTF1-203ENST00000473214 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 FXYD6-FXYD2A0A087WZ82 144 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 IGLV3-1P01715 115 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 CCL3L1P16619 93 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 PDE6GP18545 87 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 FAM74A4Q5TZK3 123 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 ATP5EP2Q5VTU8 51 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 FAM103A1Q9BTL3 118 aaKnown RBP3.37□□□□□ -1.87
RTF1-203ENST00000473214 FXYD6Q9H0Q3 95 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 WFDC10AQ9H1F0 79 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 UBE2D4Q9Y2X8 147 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 R4GMQ9 66 aa3.37□□□□□ -1.87
RTF1-203ENST00000473214 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
RTF1-203ENST00000473214 IGKV1-17P01599 117 aa3.36□□□□□ -1.87
RTF1-203ENST00000473214 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
RTF1-203ENST00000473214 PPP1R1CQ8WVI7 109 aa3.36□□□□□ -1.87
RTF1-203ENST00000473214 F8VRH5 84 aa3.35□□□□□ -1.87
RTF1-203ENST00000473214 AMELXQ99217 191 aa3.35□□□□□ -1.87
RTF1-203ENST00000473214 LYSTQ99698 3801 aa3.34□□□□□ -1.87
RTF1-203ENST00000473214 K7EIL1 84 aa3.34□□□□□ -1.87
RTF1-203ENST00000473214 M0R3E3 92 aa3.34□□□□□ -1.87
RTF1-203ENST00000473214 SPACA4Q8TDM5 124 aa3.34□□□□□ -1.87
RTF1-203ENST00000473214 KLK9Q9UKQ9 250 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms