RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
SORT1-203ENST00000471996 Q6ZRX8 168 aa10.08□□□□□ -0.8
SORT1-203ENST00000471996 PLNP26678 52 aa10.06□□□□□ -0.8
SORT1-203ENST00000471996 LINC00310P59036 64 aa10.06□□□□□ -0.8
SORT1-203ENST00000471996 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
SORT1-203ENST00000471996 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
SORT1-203ENST00000471996 CFC1P0CG37 223 aa10.05□□□□□ -0.8
SORT1-203ENST00000471996 RPL37P61927 97 aaKnown RBP10.05□□□□□ -0.8
SORT1-203ENST00000471996 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
SORT1-203ENST00000471996 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
SORT1-203ENST00000471996 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
SORT1-203ENST00000471996 H0Y8G0 127 aa10.03□□□□□ -0.8
SORT1-203ENST00000471996 LEPROTO15243 131 aa10.02□□□□□ -0.81
SORT1-203ENST00000471996 DDTP30046 118 aa10.02□□□□□ -0.81
SORT1-203ENST00000471996 HERVK_113P61574 105 aa10.02□□□□□ -0.81
SORT1-203ENST00000471996 DPM2O94777 84 aa10.01□□□□□ -0.81
SORT1-203ENST00000471996 FABP4P15090 132 aa10.01□□□□□ -0.81
SORT1-203ENST00000471996 ST20-AS1Q8NBB2 130 aa10.01□□□□□ -0.81
SORT1-203ENST00000471996 SYNE2Q8WXH0 6885 aaKnown RBP10.01□□□□□ -0.81
SORT1-203ENST00000471996 MACF1Q9UPN3 7388 aaKnown RBP10□□□□□ -0.81
SORT1-203ENST00000471996 IGKCP01834 107 aa9.99□□□□□ -0.81
SORT1-203ENST00000471996 NMUP48645 174 aa9.99□□□□□ -0.81
SORT1-203ENST00000471996 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
SORT1-203ENST00000471996 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
SORT1-203ENST00000471996 TRBV10-2A0A0K0K1G8 114 aa9.98□□□□□ -0.81
SORT1-203ENST00000471996 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
SORT1-203ENST00000471996 J3QQQ9 107 aa9.97□□□□□ -0.81
SORT1-203ENST00000471996 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
SORT1-203ENST00000471996 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
SORT1-203ENST00000471996 Q6Q795 121 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 KRTAP19-1Q8IUB9 90 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
SORT1-203ENST00000471996 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
SORT1-203ENST00000471996 SPRR1BP22528 89 aa9.92□□□□□ -0.82
SORT1-203ENST00000471996 E9PLD3 99 aa9.91□□□□□ -0.82
SORT1-203ENST00000471996 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
SORT1-203ENST00000471996 CD164Q04900 197 aa9.91□□□□□ -0.82
SORT1-203ENST00000471996 SLC25A34Q6PIV7 304 aa9.91□□□□□ -0.82
SORT1-203ENST00000471996 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
SORT1-203ENST00000471996 TRAV23DV6A0A075B6W5 121 aa9.9□□□□□ -0.82
SORT1-203ENST00000471996 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.82
SORT1-203ENST00000471996 C1orf195Q5TG92 126 aa9.9□□□□□ -0.82
SORT1-203ENST00000471996 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
SORT1-203ENST00000471996 NDUFC2O95298 119 aa9.89□□□□□ -0.83
SORT1-203ENST00000471996 PET117Q6UWS5 81 aa9.89□□□□□ -0.83
SORT1-203ENST00000471996 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
SORT1-203ENST00000471996 Q5XG85 94 aa9.88□□□□□ -0.83
SORT1-203ENST00000471996 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
SORT1-203ENST00000471996 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
SORT1-203ENST00000471996 H7C2G1 150 aa9.86□□□□□ -0.83
SORT1-203ENST00000471996 COA6Q5JTJ3 125 aaKnown RBP9.86□□□□□ -0.83
SORT1-203ENST00000471996 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
SORT1-203ENST00000471996 PRO1933Q9H354 126 aa9.83□□□□□ -0.84
SORT1-203ENST00000471996 CBY1Q9Y3M2 126 aa9.83□□□□□ -0.84
SORT1-203ENST00000471996 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
SORT1-203ENST00000471996 LCE2BO14633 110 aa9.81□□□□□ -0.84
SORT1-203ENST00000471996 TIMM17BO60830 172 aa9.81□□□□□ -0.84
SORT1-203ENST00000471996 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
SORT1-203ENST00000471996 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
SORT1-203ENST00000471996 SMIM29Q86T20 159 aa9.8□□□□□ -0.84
SORT1-203ENST00000471996 AKR1D1P51857 326 aa9.79□□□□□ -0.84
SORT1-203ENST00000471996 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
SORT1-203ENST00000471996 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
SORT1-203ENST00000471996 C20orf202A1L168 122 aa9.77□□□□□ -0.85
SORT1-203ENST00000471996 Q1RN00 199 aa9.77□□□□□ -0.85
SORT1-203ENST00000471996 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
SORT1-203ENST00000471996 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
SORT1-203ENST00000471996 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
SORT1-203ENST00000471996 LITAFQ99732 161 aa9.76□□□□□ -0.85
SORT1-203ENST00000471996 MT2AP02795 61 aa9.75□□□□□ -0.85
SORT1-203ENST00000471996 KRTDAPP60985 99 aa9.75□□□□□ -0.85
SORT1-203ENST00000471996 NPC2P61916 151 aa9.75□□□□□ -0.85
SORT1-203ENST00000471996 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
SORT1-203ENST00000471996 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
SORT1-203ENST00000471996 TAL2Q16559 108 aa9.73□□□□□ -0.85
SORT1-203ENST00000471996 LINC00518Q8N0U6 118 aa9.73□□□□□ -0.85
SORT1-203ENST00000471996 COPS9Q8WXC6 57 aa9.72□□□□□ -0.85
SORT1-203ENST00000471996 DEFB105AQ8NG35 78 aa9.71□□□□□ -0.86
SORT1-203ENST00000471996 A0A0G2JQZ4 141 aa9.7□□□□□ -0.86
SORT1-203ENST00000471996 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
SORT1-203ENST00000471996 TEX49A0A1B0GTD5 131 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 S100A1P23297 94 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
SORT1-203ENST00000471996 Q6ZVH6 145 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 Q75L30 129 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
SORT1-203ENST00000471996 MT1FP04733 61 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms