RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
PTP4A1-202ENST00000470661 PRLHP81277 87 aa3.93□□□□□ -1.78
PTP4A1-202ENST00000470661 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
PTP4A1-202ENST00000470661 BCE1O60756 84 aa3.92□□□□□ -1.78
PTP4A1-202ENST00000470661 HSBP1O75506 76 aa3.92□□□□□ -1.78
PTP4A1-202ENST00000470661 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
PTP4A1-202ENST00000470661 DAND5Q8N907 189 aa3.92□□□□□ -1.78
PTP4A1-202ENST00000470661 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
PTP4A1-202ENST00000470661 LINC01549A6NIU2 74 aa3.91□□□□□ -1.78
PTP4A1-202ENST00000470661 NCR3O14931 201 aa3.91□□□□□ -1.78
PTP4A1-202ENST00000470661 UBE2AP49459 152 aa3.91□□□□□ -1.78
PTP4A1-202ENST00000470661 PET117Q6UWS5 81 aa3.91□□□□□ -1.78
PTP4A1-202ENST00000470661 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
PTP4A1-202ENST00000470661 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 M0R378 163 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 KRTAP13-2Q52LG2 175 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.79
PTP4A1-202ENST00000470661 LEPROTL1O95214 131 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 NPC2P61916 151 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 PRR4Q16378 134 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 Q1RN00 199 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 MEIG1Q5JSS6 88 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 BOD1L2Q8IYS8 172 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 RETNLBQ9BQ08 111 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 NDUFA12Q9UI09 145 aa3.89□□□□□ -1.79
PTP4A1-202ENST00000470661 ATP6V1G1O75348 118 aa3.88□□□□□ -1.79
PTP4A1-202ENST00000470661 C3orf22Q8N5N4 141 aa3.88□□□□□ -1.79
PTP4A1-202ENST00000470661 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
PTP4A1-202ENST00000470661 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
PTP4A1-202ENST00000470661 TTTY13Q9BZ97 58 aa3.87□□□□□ -1.79
PTP4A1-202ENST00000470661 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
PTP4A1-202ENST00000470661 TRBV10-3A0A0K0K1G6 114 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 LEPROTO15243 131 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 DPM2O94777 84 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 CRYGAP11844 174 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 COX17Q14061 63 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 PLEKHB2Q96CS7 222 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 MUC2Q02817 5179 aa3.86□□□□□ -1.79
PTP4A1-202ENST00000470661 MYMXA0A1B0GTQ4 84 aa3.85□□□□□ -1.79
PTP4A1-202ENST00000470661 J3QQQ9 107 aa3.85□□□□□ -1.79
PTP4A1-202ENST00000470661 IGKCP01834 107 aa3.85□□□□□ -1.79
PTP4A1-202ENST00000470661 SMCR5Q8TEV8 140 aa3.85□□□□□ -1.79
PTP4A1-202ENST00000470661 HSPB8Q9UJY1 196 aa3.85□□□□□ -1.79
PTP4A1-202ENST00000470661 IGKV2D-26A0A0A0MRZ7 120 aa3.84□□□□□ -1.79
PTP4A1-202ENST00000470661 LGALS3P17931 250 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-202ENST00000470661 MAP1LC3CQ9BXW4 147 aa3.84□□□□□ -1.79
PTP4A1-202ENST00000470661 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
PTP4A1-202ENST00000470661 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
PTP4A1-202ENST00000470661 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-202ENST00000470661 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 C3orf79P0CE67 100 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 PLNP26678 52 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 KRTDAPP60985 99 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 HERV-K104P63124 156 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 ATOH7Q8N100 152 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 SPRR4Q96PI1 79 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 KCNQ1DNQ9H478 68 aa3.82□□□□□ -1.8
PTP4A1-202ENST00000470661 ETDCA0A1B0GVM5 59 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 DDTP30046 118 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 HERVK_113P61574 105 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 Q9BRP9 147 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
PTP4A1-202ENST00000470661 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 E9PLD3 99 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 SPRR1AP35321 89 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 FAM229BQ4G0N7 80 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
PTP4A1-202ENST00000470661 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
PTP4A1-202ENST00000470661 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
PTP4A1-202ENST00000470661 LOC107984156A0A0G2JMH3 177 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 PCP2Q8IVA1 136 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 ARL17AQ8IVW1 177 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 OR13C6PQ8NH95 151 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 LINC00308Q8TCZ7 52 aa3.78□□□□□ -1.8
PTP4A1-202ENST00000470661 LINC00587B1AMM8 73 aa3.77□□□□□ -1.81
PTP4A1-202ENST00000470661 NMUP48645 174 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms