RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 FAM30AQ9NZY2 134 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 DEFB131BA0A096LNP1 70 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 UBE2DNLQ8IWF7 75 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 LYRM9A8MSI8 78 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 Q6ZRU5 148 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 A0A0G2JQZ4 141 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 A0A1W2PNN7 141 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 ESRGQ1W209 222 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
CHD3-208ENST00000470531 KMT2BQ9UMN6 2715 aaPredicted RBP7.28□□□□□ -1.24
CHD3-208ENST00000470531 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
CHD3-208ENST00000470531 FSHBP01225 129 aa7.28□□□□□ -1.24
CHD3-208ENST00000470531 CSNK1G2-AS1Q8NCQ2 148 aa7.28□□□□□ -1.24
CHD3-208ENST00000470531 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
CHD3-208ENST00000470531 NDUFC1O43677 76 aa7.27□□□□□ -1.25
CHD3-208ENST00000470531 WFDC13Q8IUB5 93 aa7.27□□□□□ -1.25
CHD3-208ENST00000470531 ZNF469Q96JG9 3925 aaPredicted RBP7.27□□□□□ -1.25
CHD3-208ENST00000470531 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.25
CHD3-208ENST00000470531 LELP1Q5T871 98 aa7.27□□□□□ -1.25
CHD3-208ENST00000470531 C6orf48Q9UBA6 75 aa7.27□□□□□ -1.25
CHD3-208ENST00000470531 C19orf73Q9NVV2 129 aa7.26□□□□□ -1.25
CHD3-208ENST00000470531 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
CHD3-208ENST00000470531 Q8NDZ9 215 aa7.26□□□□□ -1.25
CHD3-208ENST00000470531 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 KRTAP10-3P60369 221 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 MUC7Q8TAX7 377 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 LYPD5Q6UWN5 251 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 TM2D3Q9BRN9 247 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 RBM12B-AS1Q9P1G2 102 aa7.25□□□□□ -1.25
CHD3-208ENST00000470531 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
CHD3-208ENST00000470531 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
CHD3-208ENST00000470531 KIAA0087Q14695 138 aa7.22□□□□□ -1.25
CHD3-208ENST00000470531 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
CHD3-208ENST00000470531 COX17Q14061 63 aa7.21□□□□□ -1.26
CHD3-208ENST00000470531 TMEM254Q8TBM7 123 aa7.21□□□□□ -1.26
CHD3-208ENST00000470531 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
CHD3-208ENST00000470531 C16orf95Q9H693 158 aa7.21□□□□□ -1.26
CHD3-208ENST00000470531 FAM168BA1KXE4 195 aa7.2□□□□□ -1.26
CHD3-208ENST00000470531 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
CHD3-208ENST00000470531 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
CHD3-208ENST00000470531 NDUFS5O43920 106 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 A6NED7 52 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 M0R378 163 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 MDFIQ99750 246 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 Q6ZQT0 140 aa7.19□□□□□ -1.26
CHD3-208ENST00000470531 PRLHP81277 87 aa7.18□□□□□ -1.26
CHD3-208ENST00000470531 H0Y9J4 135 aa7.17□□□□□ -1.26
CHD3-208ENST00000470531 PRYO14603 147 aa7.17□□□□□ -1.26
CHD3-208ENST00000470531 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
CHD3-208ENST00000470531 VPREB1P12018 145 aa7.16□□□□□ -1.26
CHD3-208ENST00000470531 Q6ZRP5 223 aa7.16□□□□□ -1.26
CHD3-208ENST00000470531 C1orf137Q5JT78 98 aa7.15□□□□□ -1.26
CHD3-208ENST00000470531 Q8NAQ8 132 aa7.15□□□□□ -1.26
CHD3-208ENST00000470531 A8MUN3 132 aa7.15□□□□□ -1.26
CHD3-208ENST00000470531 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
CHD3-208ENST00000470531 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
CHD3-208ENST00000470531 TENM2Q9NT68 2774 aa7.15□□□□□ -1.27
CHD3-208ENST00000470531 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
CHD3-208ENST00000470531 PDE6GP18545 87 aa7.14□□□□□ -1.27
CHD3-208ENST00000470531 C7orf33Q8WU49 177 aa7.14□□□□□ -1.27
CHD3-208ENST00000470531 SMIM29Q86T20 159 aa7.13□□□□□ -1.27
CHD3-208ENST00000470531 TRRAPQ9Y4A5 3859 aa7.13□□□□□ -1.27
CHD3-208ENST00000470531 EGFEM1PQ0D2K5 195 aa7.13□□□□□ -1.27
CHD3-208ENST00000470531 PRR15LQ9BU68 103 aa7.12□□□□□ -1.27
CHD3-208ENST00000470531 UBE2AP49459 152 aa7.12□□□□□ -1.27
CHD3-208ENST00000470531 A0A087WSZ3 146 aa7.12□□□□□ -1.27
CHD3-208ENST00000470531 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
CHD3-208ENST00000470531 KRTAP1-1Q07627 177 aa7.11□□□□□ -1.27
CHD3-208ENST00000470531 RPL37AP61513 92 aaKnown RBP7.1□□□□□ -1.27
CHD3-208ENST00000470531 IGLV9-49A0A0B4J1Y8 123 aa7.09□□□□□ -1.27
CHD3-208ENST00000470531 IGLV6-57P01721 117 aa7.09□□□□□ -1.28
CHD3-208ENST00000470531 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.28
CHD3-208ENST00000470531 LINC00208Q96KT6 92 aa7.09□□□□□ -1.28
CHD3-208ENST00000470531 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
CHD3-208ENST00000470531 CHTF8P0CG12 524 aa7.08□□□□□ -1.28
CHD3-208ENST00000470531 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
CHD3-208ENST00000470531 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
CHD3-208ENST00000470531 TRAV22A0A0B4J277 110 aa7.06□□□□□ -1.28
CHD3-208ENST00000470531 MP68P56378 58 aa7.05□□□□□ -1.28
CHD3-208ENST00000470531 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
CHD3-208ENST00000470531 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
CHD3-208ENST00000470531 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
CHD3-208ENST00000470531 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
CHD3-208ENST00000470531 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
CHD3-208ENST00000470531 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
CHD3-208ENST00000470531 K7EQZ3 153 aa7.02□□□□□ -1.29
CHD3-208ENST00000470531 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
CHD3-208ENST00000470531 Q8N377 158 aa7.01□□□□□ -1.29
CHD3-208ENST00000470531 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
CHD3-208ENST00000470531 IGKV4-1P06312 121 aa7.01□□□□□ -1.29
CHD3-208ENST00000470531 CXCL6P80162 114 aa7.01□□□□□ -1.29
CHD3-208ENST00000470531 CSMD3Q7Z407 3707 aa7□□□□□ -1.29
CHD3-208ENST00000470531 A8MU10 97 aa7□□□□□ -1.29
CHD3-208ENST00000470531 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
CHD3-208ENST00000470531 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms