RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
HDAC6-216ENST00000468949 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
HDAC6-216ENST00000468949 FXYD2P54710 66 aa5.1□□□□□ -1.59
HDAC6-216ENST00000468949 Q8NDZ9 215 aa5.1□□□□□ -1.59
HDAC6-216ENST00000468949 TRAV23DV6A0A075B6W5 121 aa5.09□□□□□ -1.59
HDAC6-216ENST00000468949 A0A0B4J2C4 111 aa5.09□□□□□ -1.59
HDAC6-216ENST00000468949 TRBV10-3A0A0K0K1G6 114 aa5.09□□□□□ -1.59
HDAC6-216ENST00000468949 H7C2G1 150 aa5.09□□□□□ -1.59
HDAC6-216ENST00000468949 PRYO14603 147 aa5.09□□□□□ -1.59
HDAC6-216ENST00000468949 ETDCA0A1B0GVM5 59 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
HDAC6-216ENST00000468949 UBE2AP49459 152 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 XGP55808 180 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 RPL37AP61513 92 aaKnown RBP5.08□□□□□ -1.6
HDAC6-216ENST00000468949 BVES-AS1Q5T3Y7 98 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 REG3GQ6UW15 175 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 DIRC1Q969H9 104 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
HDAC6-216ENST00000468949 FAT1Q14517 4588 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 IGLV6-57P01721 117 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 CFC1BP0CG36 223 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 CFC1P0CG37 223 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 C1orf137Q5JT78 98 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 Q5VSD8 79 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 PRO1854Q9UHT4 67 aa5.07□□□□□ -1.6
HDAC6-216ENST00000468949 K7ERJ3 54 aa5.06□□□□□ -1.6
HDAC6-216ENST00000468949 ZNF73O43830 326 aaPredicted RBP5.06□□□□□ -1.6
HDAC6-216ENST00000468949 PSMB2P49721 201 aa5.06□□□□□ -1.6
HDAC6-216ENST00000468949 FAM19A1Q7Z5A9 133 aa5.06□□□□□ -1.6
HDAC6-216ENST00000468949 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
HDAC6-216ENST00000468949 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
HDAC6-216ENST00000468949 BCE1O60756 84 aa5.05□□□□□ -1.6
HDAC6-216ENST00000468949 VAMP3Q15836 100 aa5.05□□□□□ -1.6
HDAC6-216ENST00000468949 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
HDAC6-216ENST00000468949 KCNQ1DNQ9H478 68 aa5.05□□□□□ -1.6
HDAC6-216ENST00000468949 SNCGO76070 127 aa5.04□□□□□ -1.6
HDAC6-216ENST00000468949 RPL28P46779 137 aaKnown RBP5.04□□□□□ -1.6
HDAC6-216ENST00000468949 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
HDAC6-216ENST00000468949 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
HDAC6-216ENST00000468949 COX6CP09669 75 aa5.03□□□□□ -1.6
HDAC6-216ENST00000468949 COX7BP24311 80 aa5.03□□□□□ -1.6
HDAC6-216ENST00000468949 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
HDAC6-216ENST00000468949 SLC25A20O43772 301 aa5.02□□□□□ -1.61
HDAC6-216ENST00000468949 PRLHP81277 87 aa5.02□□□□□ -1.61
HDAC6-216ENST00000468949 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
HDAC6-216ENST00000468949 TRBV7-6A0A0J9YX20 115 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 C9orf118A6NHY6 69 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 TSPAN13O95857 204 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 IGLV7-43P04211 117 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 COL5A1-AS1Q5SY13 56 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 Q6ZRX8 168 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 KRTAP11-1Q8IUC1 163 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
HDAC6-216ENST00000468949 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
HDAC6-216ENST00000468949 INAFM2P0DMQ5 153 aa5□□□□□ -1.61
HDAC6-216ENST00000468949 SPRR1AP35321 89 aa5□□□□□ -1.61
HDAC6-216ENST00000468949 ELOF1P60002 83 aaKnown RBP5□□□□□ -1.61
HDAC6-216ENST00000468949 SNHG12Q9BXW3 62 aa5□□□□□ -1.61
HDAC6-216ENST00000468949 DHRS4-AS1Q9P1J3 65 aa5□□□□□ -1.61
HDAC6-216ENST00000468949 B5MCH6 92 aa4.99□□□□□ -1.61
HDAC6-216ENST00000468949 H0YGX0 51 aa4.99□□□□□ -1.61
HDAC6-216ENST00000468949 TRIAP1O43715 76 aa4.99□□□□□ -1.61
HDAC6-216ENST00000468949 ZNF861PO60384 105 aa4.99□□□□□ -1.61
HDAC6-216ENST00000468949 ZNF706Q9Y5V0 76 aaPredicted RBP4.99□□□□□ -1.61
HDAC6-216ENST00000468949 H0Y9J4 135 aa4.98□□□□□ -1.61
HDAC6-216ENST00000468949 DNAL4O96015 105 aa4.98□□□□□ -1.61
HDAC6-216ENST00000468949 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-216ENST00000468949 H3BUT2 72 aa4.97□□□□□ -1.61
HDAC6-216ENST00000468949 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
HDAC6-216ENST00000468949 NAA38Q9BRA0 125 aaKnown RBP4.97□□□□□ -1.61
HDAC6-216ENST00000468949 hADV29S1A0JD25 119 aa4.96□□□□□ -1.62
HDAC6-216ENST00000468949 FABP2P12104 132 aa4.96□□□□□ -1.62
HDAC6-216ENST00000468949 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 KRTAP13-1Q8IUC0 172 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 SMCR5Q8TEV8 140 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 CLEC2BQ92478 149 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 VPS25Q9BRG1 176 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 Q9BRP9 147 aa4.95□□□□□ -1.62
HDAC6-216ENST00000468949 A0A1B0GV72 72 aa4.94□□□□□ -1.62
HDAC6-216ENST00000468949 A0A1B0GX51 115 aa4.94□□□□□ -1.62
HDAC6-216ENST00000468949 TAX1BP3O14907 124 aa4.94□□□□□ -1.62
HDAC6-216ENST00000468949 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
HDAC6-216ENST00000468949 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
HDAC6-216ENST00000468949 TRBV20-1A0A075B6N2 111 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 A0A1W2PPM0 123 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
HDAC6-216ENST00000468949 Q6ZQY7 126 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 HERC1Q15751 4861 aa4.93□□□□□ -1.62
HDAC6-216ENST00000468949 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
HDAC6-216ENST00000468949 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
HDAC6-216ENST00000468949 ERC2-IT1O76042 136 aa4.92□□□□□ -1.62
HDAC6-216ENST00000468949 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms