RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NCR3O14931 201 aa11.08□□□□□ -0.64
RPL39-202ENST00000468844 LINC01600Q96MT4 127 aa11.08□□□□□ -0.64
RPL39-202ENST00000468844 FAM30AQ9NZY2 134 aa11.07□□□□□ -0.64
RPL39-202ENST00000468844 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
RPL39-202ENST00000468844 COX6CP09669 75 aa11.06□□□□□ -0.64
RPL39-202ENST00000468844 Q6ZSA8 131 aa11.06□□□□□ -0.64
RPL39-202ENST00000468844 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
RPL39-202ENST00000468844 A0A087WYN8 130 aa11.05□□□□□ -0.64
RPL39-202ENST00000468844 NKAPP1Q8N9T2 125 aa11.05□□□□□ -0.64
RPL39-202ENST00000468844 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
RPL39-202ENST00000468844 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
RPL39-202ENST00000468844 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
RPL39-202ENST00000468844 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
RPL39-202ENST00000468844 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
RPL39-202ENST00000468844 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
RPL39-202ENST00000468844 M0R378 163 aa11.02□□□□□ -0.65
RPL39-202ENST00000468844 C7orf33Q8WU49 177 aa11.02□□□□□ -0.65
RPL39-202ENST00000468844 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
RPL39-202ENST00000468844 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
RPL39-202ENST00000468844 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
RPL39-202ENST00000468844 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
RPL39-202ENST00000468844 IGLV6-57P01721 117 aa11□□□□□ -0.65
RPL39-202ENST00000468844 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
RPL39-202ENST00000468844 LINC00167Q96N53 147 aa11□□□□□ -0.65
RPL39-202ENST00000468844 LST1O00453 97 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 S100A7L2Q5SY68 101 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
RPL39-202ENST00000468844 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 CLEC2BQ92478 149 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 TMEM126AQ9H061 195 aa10.99□□□□□ -0.65
RPL39-202ENST00000468844 HAMPP81172 84 aa10.98□□□□□ -0.65
RPL39-202ENST00000468844 H3BT86 120 aa10.97□□□□□ -0.65
RPL39-202ENST00000468844 FAT1Q14517 4588 aa10.97□□□□□ -0.65
RPL39-202ENST00000468844 RPL37AP8A6NKH3 93 aa10.97□□□□□ -0.65
RPL39-202ENST00000468844 XGP55808 180 aa10.97□□□□□ -0.65
RPL39-202ENST00000468844 MT-ATP8P03928 68 aa10.96□□□□□ -0.65
RPL39-202ENST00000468844 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.66
RPL39-202ENST00000468844 TEX49A0A1B0GTD5 131 aa10.95□□□□□ -0.66
RPL39-202ENST00000468844 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
RPL39-202ENST00000468844 HSPG2P98160 4391 aa10.94□□□□□ -0.66
RPL39-202ENST00000468844 SRRM2Q9UQ35 2752 aaKnown RBP10.94□□□□□ -0.66
RPL39-202ENST00000468844 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
RPL39-202ENST00000468844 RYR1P21817 5038 aa10.93□□□□□ -0.66
RPL39-202ENST00000468844 TRAV23DV6A0A075B6W5 121 aa10.92□□□□□ -0.66
RPL39-202ENST00000468844 UBE2BP63146 152 aa10.92□□□□□ -0.66
RPL39-202ENST00000468844 KCNQ1DNQ9H478 68 aa10.92□□□□□ -0.66
RPL39-202ENST00000468844 KIAA1109Q2LD37 5005 aa10.91□□□□□ -0.66
RPL39-202ENST00000468844 RPL28P46779 137 aaKnown RBP10.9□□□□□ -0.66
RPL39-202ENST00000468844 ZNF73O43830 326 aaPredicted RBP10.88□□□□□ -0.67
RPL39-202ENST00000468844 PRYO14603 147 aa10.88□□□□□ -0.67
RPL39-202ENST00000468844 C6orf99Q4VX62 202 aa10.88□□□□□ -0.67
RPL39-202ENST00000468844 A0A1B0GV72 72 aa10.87□□□□□ -0.67
RPL39-202ENST00000468844 SPRR1AP35321 89 aa10.86□□□□□ -0.67
RPL39-202ENST00000468844 TRACP01848 142 aa10.86□□□□□ -0.67
RPL39-202ENST00000468844 REG3GQ6UW15 175 aa10.86□□□□□ -0.67
RPL39-202ENST00000468844 KRTAP4-16G5E9R7 235 aaPredicted RBP10.85□□□□□ -0.67
RPL39-202ENST00000468844 DIRC1Q969H9 104 aa10.84□□□□□ -0.67
RPL39-202ENST00000468844 PSORS1C2Q9UIG4 136 aa10.84□□□□□ -0.67
RPL39-202ENST00000468844 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
RPL39-202ENST00000468844 SNCGO76070 127 aa10.82□□□□□ -0.68
RPL39-202ENST00000468844 FAM218AQ96MZ4 157 aa10.82□□□□□ -0.68
RPL39-202ENST00000468844 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
RPL39-202ENST00000468844 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
RPL39-202ENST00000468844 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
RPL39-202ENST00000468844 TRBV7-6A0A0J9YX20 115 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 B5MCH6 92 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 SMR3BP02814 79 aaPredicted RBP10.78□□□□□ -0.68
RPL39-202ENST00000468844 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 Q6ZRX8 168 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 FAM19A1Q7Z5A9 133 aa10.78□□□□□ -0.68
RPL39-202ENST00000468844 BCE1O60756 84 aa10.77□□□□□ -0.69
RPL39-202ENST00000468844 COX7BP24311 80 aa10.77□□□□□ -0.69
RPL39-202ENST00000468844 PRLHP81277 87 aa10.77□□□□□ -0.69
RPL39-202ENST00000468844 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.69
RPL39-202ENST00000468844 BIRC6Q9NR09 4857 aa10.77□□□□□ -0.69
RPL39-202ENST00000468844 H0YGX0 51 aa10.76□□□□□ -0.69
RPL39-202ENST00000468844 Q6Q795 121 aa10.76□□□□□ -0.69
RPL39-202ENST00000468844 ACYP1P07311 99 aa10.75□□□□□ -0.69
RPL39-202ENST00000468844 Q9BRP9 147 aa10.75□□□□□ -0.69
RPL39-202ENST00000468844 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
RPL39-202ENST00000468844 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
RPL39-202ENST00000468844 H0Y9J4 135 aa10.72□□□□□ -0.69
RPL39-202ENST00000468844 UBE2AP49459 152 aa10.72□□□□□ -0.69
RPL39-202ENST00000468844 SMCR5Q8TEV8 140 aa10.71□□□□□ -0.69
RPL39-202ENST00000468844 ANAPC13Q9BS18 74 aa10.71□□□□□ -0.69
RPL39-202ENST00000468844 DNAL4O96015 105 aa10.7□□□□□ -0.7
RPL39-202ENST00000468844 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
RPL39-202ENST00000468844 INAFM2P0DMQ5 153 aa10.69□□□□□ -0.7
RPL39-202ENST00000468844 HIGD2AQ9BW72 106 aa10.69□□□□□ -0.7
RPL39-202ENST00000468844 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
RPL39-202ENST00000468844 PKHD1L1Q86WI1 4243 aa10.68□□□□□ -0.7
RPL39-202ENST00000468844 ZNF861PO60384 105 aa10.68□□□□□ -0.7
RPL39-202ENST00000468844 NDUFV3P56181 108 aaKnown RBP10.68□□□□□ -0.7
RPL39-202ENST00000468844 RPL37AP61513 92 aaKnown RBP10.68□□□□□ -0.7
RPL39-202ENST00000468844 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
RPL39-202ENST00000468844 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
RPL39-202ENST00000468844 A0A1B0GX51 115 aa10.66□□□□□ -0.7
RPL39-202ENST00000468844 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms