RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 A4D1N5 150 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 A6NDN8 102 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 H7C2G1 150 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 NCR3O14931 201 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 IFITM1P13164 125 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 FXYD2P54710 66 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 TAL2Q16559 108 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 C9orf129Q5T035 196 aaKnown RBP2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 BVES-AS1Q5T3Y7 98 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 SDIM1Q6ZPB5 146 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 Q6ZVH6 145 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 FAM19A5Q7Z5A7 132 aaPredicted RBP2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 COPS9Q8WXC6 57 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 RAB37Q96AX2 223 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 FAM218AQ96MZ4 157 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 NHP2Q9NX24 153 aaKnown RBP2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 PKD1P98161 4303 aa2.59□□□□□ -2
TMEM39A-204ENST00000468545 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
TMEM39A-204ENST00000468545 HECTD4Q9Y4D8 3996 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 A0A1W2PNN7 141 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 C16orf90A8MZG2 172 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 PANO1I0J062 215 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 K7ERJ3 54 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 M0R143 59 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 TLX1NBP0CAT3 122 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 KRTAP10-1P60331 282 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 HAMPP81172 84 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 NKAPP1Q8N9T2 125 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 PKIGQ9Y2B9 76 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 C22orf24Q9Y442 160 aa2.58□□□□□ -2
TMEM39A-204ENST00000468545 RPL37AP8A6NKH3 93 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 M0R378 163 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 Q1RN00 199 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 S100A7L2Q5SY68 101 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 PHF5AQ7RTV0 110 aaKnown RBP2.57□□□□□ -2
TMEM39A-204ENST00000468545 Q8NDZ9 215 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 SNHG12Q9BXW3 62 aa2.57□□□□□ -2
TMEM39A-204ENST00000468545 IGKV2-28A0A075B6P5 120 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 LOC107984156A0A0G2JMH3 177 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 A0A1B0GVY2 172 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 M0QXV9 152 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 NDUFC2O95298 119 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 IGKV2D-28P01615 120 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 RPL13AP40429 203 aaKnown RBP2.56□□□□□ -2
TMEM39A-204ENST00000468545 PSMB2P49721 201 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 UBE2BP63146 152 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 LINC00337Q8N6G1 96 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 C7orf33Q8WU49 177 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 LINC00167Q96N53 147 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 NAA38Q9BRA0 125 aaKnown RBP2.56□□□□□ -2
TMEM39A-204ENST00000468545 LINC00474Q9P2X8 69 aa2.56□□□□□ -2
TMEM39A-204ENST00000468545 LRP1BQ9NZR2 4599 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 TRBV10-3A0A0K0K1G6 114 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 SCGB1C2P0DMR2 95 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 MRPL55Q7Z7F7 128 aaKnown RBP2.55□□□□□ -2
TMEM39A-204ENST00000468545 Q8NBF4 154 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 SPACA4Q8TDM5 124 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 PRO1854Q9UHT4 67 aa2.55□□□□□ -2
TMEM39A-204ENST00000468545 A0A0B4J2C4 111 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 TRBV10-2A0A0K0K1G8 114 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 EPM2AB3EWF7 344 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 H3BUT2 72 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 SMR3BP02814 79 aaPredicted RBP2.54□□□□□ -2
TMEM39A-204ENST00000468545 COL5A1-AS1Q5SY13 56 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 SCXQ7RTU7 201 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 CIRBP-AS1Q8TBR5 109 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 SMIM11BQ8TCY0 68 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 TMEM126AQ9H061 195 aa2.54□□□□□ -2
TMEM39A-204ENST00000468545 IGLV1-50A0A075B6I6 118 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 TRAV23DV6A0A075B6W5 121 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 A0A1B0GWB2 263 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 TAX1BP3O14907 124 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 TSPAN13O95857 204 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 IGLV6-57P01721 117 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 LCE1FQ5T754 118 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 PPDPFQ9H3Y8 114 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
TMEM39A-204ENST00000468545 EPPK1P58107 5090 aaKnown RBP2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 ETDCA0A1B0GVM5 59 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 COX6CP09669 75 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 COX7BP24311 80 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 VAMP3Q15836 100 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 C6orf99Q4VX62 202 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 C1orf137Q5JT78 98 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 Q6ZVQ6 151 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 FAM19A1Q7Z5A9 133 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 DIRC1Q969H9 104 aa2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
TMEM39A-204ENST00000468545 FABP2P12104 132 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 UBE2AP49459 152 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 Q6ZSA8 131 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 Q8N377 158 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms