RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
YBX1-204ENST00000467957 KRTAP13-2Q52LG2 175 aa10.98□□□□□ -0.65
YBX1-204ENST00000467957 S100A7L2Q5SY68 101 aa10.97□□□□□ -0.65
YBX1-204ENST00000467957 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
YBX1-204ENST00000467957 VAMP8Q9BV40 100 aa10.96□□□□□ -0.65
YBX1-204ENST00000467957 B5MCH6 92 aa10.95□□□□□ -0.66
YBX1-204ENST00000467957 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
YBX1-204ENST00000467957 SPRR4Q96PI1 79 aa10.95□□□□□ -0.66
YBX1-204ENST00000467957 ZNF706Q9Y5V0 76 aaPredicted RBP10.95□□□□□ -0.66
YBX1-204ENST00000467957 SPATA45Q537H7 98 aa10.94□□□□□ -0.66
YBX1-204ENST00000467957 SMCR5Q8TEV8 140 aa10.94□□□□□ -0.66
YBX1-204ENST00000467957 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
YBX1-204ENST00000467957 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
YBX1-204ENST00000467957 COX8AP10176 69 aa10.93□□□□□ -0.66
YBX1-204ENST00000467957 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
YBX1-204ENST00000467957 CBY1Q9Y3M2 126 aa10.92□□□□□ -0.66
YBX1-204ENST00000467957 DLEU1O43261 78 aa10.91□□□□□ -0.66
YBX1-204ENST00000467957 Q6ZRX8 168 aa10.91□□□□□ -0.66
YBX1-204ENST00000467957 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
YBX1-204ENST00000467957 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
YBX1-204ENST00000467957 Q6ZVH6 145 aa10.89□□□□□ -0.67
YBX1-204ENST00000467957 LINC00518Q8N0U6 118 aa10.89□□□□□ -0.67
YBX1-204ENST00000467957 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
YBX1-204ENST00000467957 IFITM1P13164 125 aa10.88□□□□□ -0.67
YBX1-204ENST00000467957 Q9BRP9 147 aa10.88□□□□□ -0.67
YBX1-204ENST00000467957 LOC105371267A0A1B0GV96 52 aa10.87□□□□□ -0.67
YBX1-204ENST00000467957 TSPAN13O95857 204 aa10.87□□□□□ -0.67
YBX1-204ENST00000467957 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
YBX1-204ENST00000467957 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
YBX1-204ENST00000467957 C14orf144Q96I85 54 aa10.87□□□□□ -0.67
YBX1-204ENST00000467957 ERC2-IT1O76042 136 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 CTAG1AP78358 180 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 C3orf22Q8N5N4 141 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 OR13C6PQ8NH95 151 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 UBR4Q5T4S7 5183 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 LRP2P98164 4655 aa10.86□□□□□ -0.67
YBX1-204ENST00000467957 SMIM6P0DI80 62 aa10.84□□□□□ -0.67
YBX1-204ENST00000467957 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
YBX1-204ENST00000467957 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
YBX1-204ENST00000467957 PRR4Q16378 134 aa10.81□□□□□ -0.68
YBX1-204ENST00000467957 GAGE2AQ6NT46 116 aa10.81□□□□□ -0.68
YBX1-204ENST00000467957 MUSTN1Q8IVN3 82 aa10.81□□□□□ -0.68
YBX1-204ENST00000467957 HIGD1BQ9P298 99 aa10.81□□□□□ -0.68
YBX1-204ENST00000467957 SPAG11AQ6PDA7 123 aa10.79□□□□□ -0.68
YBX1-204ENST00000467957 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
YBX1-204ENST00000467957 ELOF1P60002 83 aaKnown RBP10.76□□□□□ -0.69
YBX1-204ENST00000467957 C6orf99Q4VX62 202 aa10.76□□□□□ -0.69
YBX1-204ENST00000467957 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
YBX1-204ENST00000467957 LPAP08519 4548 aa10.76□□□□□ -0.69
YBX1-204ENST00000467957 TRBV7-6A0A0J9YX20 115 aa10.75□□□□□ -0.69
YBX1-204ENST00000467957 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
YBX1-204ENST00000467957 A6NDN8 102 aa10.74□□□□□ -0.69
YBX1-204ENST00000467957 COX7BP24311 80 aa10.74□□□□□ -0.69
YBX1-204ENST00000467957 Q8NBF4 154 aa10.74□□□□□ -0.69
YBX1-204ENST00000467957 UQCR10Q9UDW1 63 aa10.74□□□□□ -0.69
YBX1-204ENST00000467957 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
YBX1-204ENST00000467957 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
YBX1-204ENST00000467957 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
YBX1-204ENST00000467957 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
YBX1-204ENST00000467957 IGLV9-49A0A0B4J1Y8 123 aa10.71□□□□□ -0.69
YBX1-204ENST00000467957 SPRR1BP22528 89 aa10.71□□□□□ -0.69
YBX1-204ENST00000467957 MOBPQ13875 183 aa10.71□□□□□ -0.69
YBX1-204ENST00000467957 TAL2Q16559 108 aa10.71□□□□□ -0.69
YBX1-204ENST00000467957 A4D1N5 150 aa10.7□□□□□ -0.7
YBX1-204ENST00000467957 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
YBX1-204ENST00000467957 SPINK1P00995 79 aa10.69□□□□□ -0.7
YBX1-204ENST00000467957 C12orf57Q99622 126 aa10.69□□□□□ -0.7
YBX1-204ENST00000467957 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
YBX1-204ENST00000467957 PRO1933Q9H354 126 aa10.68□□□□□ -0.7
YBX1-204ENST00000467957 CEND1Q8N111 149 aa10.66□□□□□ -0.7
YBX1-204ENST00000467957 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
YBX1-204ENST00000467957 HSD52Q0P140 79 aa10.65□□□□□ -0.7
YBX1-204ENST00000467957 RPS29P62273 56 aaKnown RBP10.64□□□□□ -0.71
YBX1-204ENST00000467957 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
YBX1-204ENST00000467957 IGLV7-46A0A075B6I9 117 aa10.61□□□□□ -0.71
YBX1-204ENST00000467957 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
YBX1-204ENST00000467957 LAMTOR3Q9UHA4 124 aa10.61□□□□□ -0.71
YBX1-204ENST00000467957 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 A6NJY4 79 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 TSTD3H0UI37 97 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 CFC1P0CG37 223 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 FXYD2P54710 66 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 TPRXLQ17RH7 258 aa10.6□□□□□ -0.71
YBX1-204ENST00000467957 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
YBX1-204ENST00000467957 IGLV5-48A0A075B6I7 105 aa10.59□□□□□ -0.71
YBX1-204ENST00000467957 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
YBX1-204ENST00000467957 VAMP3Q15836 100 aa10.58□□□□□ -0.72
YBX1-204ENST00000467957 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
YBX1-204ENST00000467957 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
YBX1-204ENST00000467957 Q8N377 158 aa10.57□□□□□ -0.72
YBX1-204ENST00000467957 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
YBX1-204ENST00000467957 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
YBX1-204ENST00000467957 SLC25A20O43772 301 aa10.55□□□□□ -0.72
YBX1-204ENST00000467957 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
YBX1-204ENST00000467957 Q1RN00 199 aa10.54□□□□□ -0.72
YBX1-204ENST00000467957 LINC00575Q6W349 94 aa10.54□□□□□ -0.72
YBX1-204ENST00000467957 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.73
YBX1-204ENST00000467957 CDIP1Q9H305 208 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms