RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
SQSTM1-205ENST00000464493 PPDPFQ9H3Y8 114 aa8.69□□□□□ -1.02
SQSTM1-205ENST00000464493 COX8AP10176 69 aa8.68□□□□□ -1.02
SQSTM1-205ENST00000464493 OR13C6PQ8NH95 151 aa8.68□□□□□ -1.02
SQSTM1-205ENST00000464493 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
SQSTM1-205ENST00000464493 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
SQSTM1-205ENST00000464493 PAM16Q9Y3D7 125 aa8.67□□□□□ -1.02
SQSTM1-205ENST00000464493 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
SQSTM1-205ENST00000464493 B5MCH6 92 aa8.66□□□□□ -1.02
SQSTM1-205ENST00000464493 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
SQSTM1-205ENST00000464493 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
SQSTM1-205ENST00000464493 DLEU1O43261 78 aa8.65□□□□□ -1.02
SQSTM1-205ENST00000464493 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
SQSTM1-205ENST00000464493 RPL13AP40429 203 aaKnown RBP8.64□□□□□ -1.03
SQSTM1-205ENST00000464493 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
SQSTM1-205ENST00000464493 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
SQSTM1-205ENST00000464493 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
SQSTM1-205ENST00000464493 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
SQSTM1-205ENST00000464493 CRYGAP11844 174 aa8.62□□□□□ -1.03
SQSTM1-205ENST00000464493 HINT1P49773 126 aaPredicted RBP8.62□□□□□ -1.03
SQSTM1-205ENST00000464493 Q6ZRX8 168 aa8.62□□□□□ -1.03
SQSTM1-205ENST00000464493 A0A087X002 238 aa8.61□□□□□ -1.03
SQSTM1-205ENST00000464493 A6NDN8 102 aa8.61□□□□□ -1.03
SQSTM1-205ENST00000464493 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
SQSTM1-205ENST00000464493 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
SQSTM1-205ENST00000464493 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
SQSTM1-205ENST00000464493 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
SQSTM1-205ENST00000464493 Q9BRP9 147 aa8.6□□□□□ -1.03
SQSTM1-205ENST00000464493 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
SQSTM1-205ENST00000464493 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
SQSTM1-205ENST00000464493 A4D1N5 150 aa8.58□□□□□ -1.04
SQSTM1-205ENST00000464493 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
SQSTM1-205ENST00000464493 ERC2-IT1O76042 136 aa8.57□□□□□ -1.04
SQSTM1-205ENST00000464493 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
SQSTM1-205ENST00000464493 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
SQSTM1-205ENST00000464493 KRTAP13-2Q52LG2 175 aa8.56□□□□□ -1.04
SQSTM1-205ENST00000464493 COX7BP24311 80 aa8.55□□□□□ -1.04
SQSTM1-205ENST00000464493 TRBV7-6A0A0J9YX20 115 aa8.54□□□□□ -1.04
SQSTM1-205ENST00000464493 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
SQSTM1-205ENST00000464493 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
SQSTM1-205ENST00000464493 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
SQSTM1-205ENST00000464493 SMIM11BQ8TCY0 68 aa8.53□□□□□ -1.04
SQSTM1-205ENST00000464493 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
SQSTM1-205ENST00000464493 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
SQSTM1-205ENST00000464493 C12orf57Q99622 126 aa8.52□□□□□ -1.05
SQSTM1-205ENST00000464493 A0A1B0GWB2 263 aa8.51□□□□□ -1.05
SQSTM1-205ENST00000464493 TAL2Q16559 108 aa8.5□□□□□ -1.05
SQSTM1-205ENST00000464493 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
SQSTM1-205ENST00000464493 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
SQSTM1-205ENST00000464493 CFC1BP0CG36 223 aa8.48□□□□□ -1.05
SQSTM1-205ENST00000464493 CFC1P0CG37 223 aa8.48□□□□□ -1.05
SQSTM1-205ENST00000464493 VAMP3Q15836 100 aa8.48□□□□□ -1.05
SQSTM1-205ENST00000464493 CEND1Q8N111 149 aa8.48□□□□□ -1.05
SQSTM1-205ENST00000464493 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
SQSTM1-205ENST00000464493 HMCN2Q8NDA2 5059 aa8.47□□□□□ -1.05
SQSTM1-205ENST00000464493 TSPAN13O95857 204 aa8.46□□□□□ -1.06
SQSTM1-205ENST00000464493 RAB37Q96AX2 223 aa8.46□□□□□ -1.06
SQSTM1-205ENST00000464493 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
SQSTM1-205ENST00000464493 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
SQSTM1-205ENST00000464493 A0A0B4J2C4 111 aa8.44□□□□□ -1.06
SQSTM1-205ENST00000464493 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
SQSTM1-205ENST00000464493 A6NJY4 79 aa8.44□□□□□ -1.06
SQSTM1-205ENST00000464493 NHP2Q9NX24 153 aaKnown RBP8.44□□□□□ -1.06
SQSTM1-205ENST00000464493 H7C2G1 150 aa8.43□□□□□ -1.06
SQSTM1-205ENST00000464493 SPRR1BP22528 89 aa8.43□□□□□ -1.06
SQSTM1-205ENST00000464493 HSD52Q0P140 79 aa8.43□□□□□ -1.06
SQSTM1-205ENST00000464493 SLC25A20O43772 301 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 FXYD2P54710 66 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 MOBPQ13875 183 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 Q8NBF4 154 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
SQSTM1-205ENST00000464493 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SQSTM1-205ENST00000464493 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
SQSTM1-205ENST00000464493 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
SQSTM1-205ENST00000464493 LINC00575Q6W349 94 aa8.41□□□□□ -1.06
SQSTM1-205ENST00000464493 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
SQSTM1-205ENST00000464493 SMIM6P0DI80 62 aa8.4□□□□□ -1.06
SQSTM1-205ENST00000464493 CTAG1AP78358 180 aa8.4□□□□□ -1.06
SQSTM1-205ENST00000464493 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.06
SQSTM1-205ENST00000464493 C9orf153Q5TBE3 101 aa8.39□□□□□ -1.07
SQSTM1-205ENST00000464493 LAMTOR3Q9UHA4 124 aa8.39□□□□□ -1.07
SQSTM1-205ENST00000464493 IGLV5-48A0A075B6I7 105 aa8.38□□□□□ -1.07
SQSTM1-205ENST00000464493 hADV29S1A0JD25 119 aa8.38□□□□□ -1.07
SQSTM1-205ENST00000464493 LINC01547P58512 204 aaPredicted RBP8.38□□□□□ -1.07
SQSTM1-205ENST00000464493 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
SQSTM1-205ENST00000464493 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
SQSTM1-205ENST00000464493 Q1RN00 199 aa8.37□□□□□ -1.07
SQSTM1-205ENST00000464493 PRR4Q16378 134 aa8.36□□□□□ -1.07
SQSTM1-205ENST00000464493 SPINK1P00995 79 aa8.35□□□□□ -1.07
SQSTM1-205ENST00000464493 SMIM29Q86T20 159 aa8.35□□□□□ -1.07
SQSTM1-205ENST00000464493 H0YGX0 51 aa8.34□□□□□ -1.07
SQSTM1-205ENST00000464493 Q6ZQY7 126 aa8.34□□□□□ -1.07
SQSTM1-205ENST00000464493 Q8N377 158 aa8.34□□□□□ -1.07
SQSTM1-205ENST00000464493 K7ERJ3 54 aa8.32□□□□□ -1.08
SQSTM1-205ENST00000464493 SNCGO76070 127 aa8.32□□□□□ -1.08
SQSTM1-205ENST00000464493 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.32□□□□□ -1.08
SQSTM1-205ENST00000464493 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
SQSTM1-205ENST00000464493 LRP2P98164 4655 aa8.31□□□□□ -1.08
SQSTM1-205ENST00000464493 LPAP08519 4548 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms