RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
SND1-203ENST00000463020 ZNF561-AS1K7EIQ3 104 aa9.48□□□□□ -0.89
SND1-203ENST00000463020 NPC2P61916 151 aa9.48□□□□□ -0.89
SND1-203ENST00000463020 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
SND1-203ENST00000463020 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
SND1-203ENST00000463020 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
SND1-203ENST00000463020 TCL1BO95988 128 aa9.47□□□□□ -0.89
SND1-203ENST00000463020 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
SND1-203ENST00000463020 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.9
SND1-203ENST00000463020 C5orf38Q86SI9 138 aa9.46□□□□□ -0.9
SND1-203ENST00000463020 DAND5Q8N907 189 aa9.46□□□□□ -0.9
SND1-203ENST00000463020 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
SND1-203ENST00000463020 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
SND1-203ENST00000463020 PKIGQ9Y2B9 76 aa9.45□□□□□ -0.9
SND1-203ENST00000463020 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
SND1-203ENST00000463020 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
SND1-203ENST00000463020 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
SND1-203ENST00000463020 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
SND1-203ENST00000463020 LINC00158P58513 81 aa9.43□□□□□ -0.9
SND1-203ENST00000463020 ETDBQ3ZM63 59 aa9.43□□□□□ -0.9
SND1-203ENST00000463020 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
SND1-203ENST00000463020 M0QXV9 152 aa9.42□□□□□ -0.9
SND1-203ENST00000463020 COX7A2LO14548 114 aa9.42□□□□□ -0.9
SND1-203ENST00000463020 TRIAP1O43715 76 aa9.42□□□□□ -0.9
SND1-203ENST00000463020 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
SND1-203ENST00000463020 Q8IZM0 81 aa9.42□□□□□ -0.9
SND1-203ENST00000463020 H0Y9J4 135 aa9.41□□□□□ -0.9
SND1-203ENST00000463020 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
SND1-203ENST00000463020 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
SND1-203ENST00000463020 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 C9JAW5 83 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 MALP21145 153 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 CXCL5P42830 114 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 PRR4Q16378 134 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 MIR7-3HGQ8N6C7 128 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
SND1-203ENST00000463020 SLC25A20O43772 301 aa9.39□□□□□ -0.91
SND1-203ENST00000463020 CKS1BP61024 79 aa9.39□□□□□ -0.91
SND1-203ENST00000463020 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
SND1-203ENST00000463020 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
SND1-203ENST00000463020 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
SND1-203ENST00000463020 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
SND1-203ENST00000463020 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
SND1-203ENST00000463020 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
SND1-203ENST00000463020 TRBV10-2A0A0K0K1G8 114 aa9.37□□□□□ -0.91
SND1-203ENST00000463020 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
SND1-203ENST00000463020 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
SND1-203ENST00000463020 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
SND1-203ENST00000463020 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
SND1-203ENST00000463020 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
SND1-203ENST00000463020 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
SND1-203ENST00000463020 LST1O00453 97 aa9.35□□□□□ -0.91
SND1-203ENST00000463020 PFN2P35080 140 aa9.35□□□□□ -0.91
SND1-203ENST00000463020 ANKRD29Q8N6D5 301 aa9.35□□□□□ -0.91
SND1-203ENST00000463020 H3BT86 120 aa9.34□□□□□ -0.91
SND1-203ENST00000463020 COX17Q14061 63 aa9.34□□□□□ -0.91
SND1-203ENST00000463020 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
SND1-203ENST00000463020 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
SND1-203ENST00000463020 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
SND1-203ENST00000463020 CLEC2BQ92478 149 aa9.32□□□□□ -0.92
SND1-203ENST00000463020 KIAA0087Q14695 138 aa9.31□□□□□ -0.92
SND1-203ENST00000463020 RPL28P46779 137 aaKnown RBP9.3□□□□□ -0.92
SND1-203ENST00000463020 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
SND1-203ENST00000463020 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
SND1-203ENST00000463020 TRACP01848 142 aa9.29□□□□□ -0.92
SND1-203ENST00000463020 H0YGX0 51 aa9.28□□□□□ -0.92
SND1-203ENST00000463020 TLX1NBP0CAT3 122 aa9.28□□□□□ -0.92
SND1-203ENST00000463020 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.93
SND1-203ENST00000463020 IGKV2D-28P01615 120 aa9.27□□□□□ -0.93
SND1-203ENST00000463020 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
SND1-203ENST00000463020 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
SND1-203ENST00000463020 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
SND1-203ENST00000463020 SIGMAR1Q99720 223 aa9.27□□□□□ -0.93
SND1-203ENST00000463020 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
SND1-203ENST00000463020 NDUFC2O95298 119 aa9.26□□□□□ -0.93
SND1-203ENST00000463020 PCP4P48539 62 aa9.26□□□□□ -0.93
SND1-203ENST00000463020 A0A087X002 238 aa9.25□□□□□ -0.93
SND1-203ENST00000463020 UBE2BP63146 152 aa9.25□□□□□ -0.93
SND1-203ENST00000463020 SMIM11BQ8TCY0 68 aa9.24□□□□□ -0.93
SND1-203ENST00000463020 F8WDY8 70 aa9.21□□□□□ -0.94
SND1-203ENST00000463020 DNAL4O96015 105 aa9.21□□□□□ -0.94
SND1-203ENST00000463020 ZNF861PO60384 105 aa9.2□□□□□ -0.94
SND1-203ENST00000463020 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
SND1-203ENST00000463020 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
SND1-203ENST00000463020 SNCGO76070 127 aa9.19□□□□□ -0.94
SND1-203ENST00000463020 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
SND1-203ENST00000463020 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
SND1-203ENST00000463020 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
SND1-203ENST00000463020 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
SND1-203ENST00000463020 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
SND1-203ENST00000463020 A0A1B0GX51 115 aa9.17□□□□□ -0.94
SND1-203ENST00000463020 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
SND1-203ENST00000463020 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
SND1-203ENST00000463020 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
SND1-203ENST00000463020 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
SND1-203ENST00000463020 C22orf24Q9Y442 160 aa9.15□□□□□ -0.94
SND1-203ENST00000463020 NCR3O14931 201 aa9.14□□□□□ -0.95
SND1-203ENST00000463020 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
SND1-203ENST00000463020 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
SND1-203ENST00000463020 ACYP1P07311 99 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms