RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 Q6ZRP5 223 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
SMPD4-213ENST00000454468 LINC00588Q9Y4M8 146 aa7.96□□□□□ -1.14
SMPD4-213ENST00000454468 SNURFQ9Y675 71 aa7.96□□□□□ -1.14
SMPD4-213ENST00000454468 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
SMPD4-213ENST00000454468 C3orf84H3BNL1 204 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 C15orf56Q8N910 161 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 M0R378 163 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 CCKP06307 115 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 M0R2N4 97 aa7.95□□□□□ -1.14
SMPD4-213ENST00000454468 K7EIL1 84 aa7.93□□□□□ -1.14
SMPD4-213ENST00000454468 LINC01556Q5JQF7 62 aa7.93□□□□□ -1.14
SMPD4-213ENST00000454468 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 UPK3BQ9BT76 320 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 RMI2Q96E14 147 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 A0A096LNI7 61 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 VPREB1P12018 145 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
SMPD4-213ENST00000454468 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
SMPD4-213ENST00000454468 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.14
SMPD4-213ENST00000454468 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.15
SMPD4-213ENST00000454468 C7orf33Q8WU49 177 aa7.9□□□□□ -1.15
SMPD4-213ENST00000454468 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
SMPD4-213ENST00000454468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
SMPD4-213ENST00000454468 Q8N9L7 120 aa7.88□□□□□ -1.15
SMPD4-213ENST00000454468 H3BNG1 76 aa7.88□□□□□ -1.15
SMPD4-213ENST00000454468 F8WEM9 126 aa7.87□□□□□ -1.15
SMPD4-213ENST00000454468 Q6JHZ5 121 aa7.87□□□□□ -1.15
SMPD4-213ENST00000454468 NREPQ16612 68 aa7.86□□□□□ -1.15
SMPD4-213ENST00000454468 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
SMPD4-213ENST00000454468 MUC7Q8TAX7 377 aa7.85□□□□□ -1.15
SMPD4-213ENST00000454468 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
SMPD4-213ENST00000454468 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMPD4-213ENST00000454468 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
SMPD4-213ENST00000454468 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
SMPD4-213ENST00000454468 Q6ZVQ6 151 aa7.84□□□□□ -1.15
SMPD4-213ENST00000454468 DNAH10OSP0CZ25 163 aa7.84□□□□□ -1.16
SMPD4-213ENST00000454468 PRLHP81277 87 aa7.84□□□□□ -1.16
SMPD4-213ENST00000454468 MDFIQ99750 246 aa7.84□□□□□ -1.16
SMPD4-213ENST00000454468 A0A0G2JQZ4 141 aa7.83□□□□□ -1.16
SMPD4-213ENST00000454468 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
SMPD4-213ENST00000454468 ELOF1P60002 83 aaKnown RBP7.83□□□□□ -1.16
SMPD4-213ENST00000454468 CHTF8P0CG12 524 aa7.83□□□□□ -1.16
SMPD4-213ENST00000454468 Q6ZQT0 140 aa7.83□□□□□ -1.16
SMPD4-213ENST00000454468 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
SMPD4-213ENST00000454468 TRBV7-6A0A0J9YX20 115 aa7.81□□□□□ -1.16
SMPD4-213ENST00000454468 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
SMPD4-213ENST00000454468 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
SMPD4-213ENST00000454468 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
SMPD4-213ENST00000454468 DEFB116Q30KQ4 102 aa7.8□□□□□ -1.16
SMPD4-213ENST00000454468 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
SMPD4-213ENST00000454468 TM2D3Q9BRN9 247 aa7.79□□□□□ -1.16
SMPD4-213ENST00000454468 CSMD3Q7Z407 3707 aa7.78□□□□□ -1.16
SMPD4-213ENST00000454468 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
SMPD4-213ENST00000454468 BPY2O14599 106 aa7.78□□□□□ -1.16
SMPD4-213ENST00000454468 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
SMPD4-213ENST00000454468 PDE6GP18545 87 aa7.77□□□□□ -1.17
SMPD4-213ENST00000454468 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
SMPD4-213ENST00000454468 UBE2AP49459 152 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 C1orf137Q5JT78 98 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 H7BZZ5 65 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
SMPD4-213ENST00000454468 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
SMPD4-213ENST00000454468 DHRS4-AS1Q9P1J3 65 aa7.74□□□□□ -1.17
SMPD4-213ENST00000454468 TRAV7A0A075B6U4 112 aa7.73□□□□□ -1.17
SMPD4-213ENST00000454468 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
SMPD4-213ENST00000454468 Q6ZRX8 168 aa7.72□□□□□ -1.17
SMPD4-213ENST00000454468 Q8N377 158 aa7.72□□□□□ -1.17
SMPD4-213ENST00000454468 H3BQ85 93 aa7.71□□□□□ -1.18
SMPD4-213ENST00000454468 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
SMPD4-213ENST00000454468 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
SMPD4-213ENST00000454468 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
SMPD4-213ENST00000454468 Q9BRP9 147 aa7.7□□□□□ -1.18
SMPD4-213ENST00000454468 PSPHP1O15172 72 aa7.7□□□□□ -1.18
SMPD4-213ENST00000454468 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
SMPD4-213ENST00000454468 TGP01266 2768 aa7.68□□□□□ -1.18
SMPD4-213ENST00000454468 PRYO14603 147 aa7.68□□□□□ -1.18
SMPD4-213ENST00000454468 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
SMPD4-213ENST00000454468 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
SMPD4-213ENST00000454468 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
SMPD4-213ENST00000454468 A0A087WSZ3 146 aa7.66□□□□□ -1.18
SMPD4-213ENST00000454468 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
SMPD4-213ENST00000454468 IGLV9-49A0A0B4J1Y8 123 aa7.66□□□□□ -1.18
SMPD4-213ENST00000454468 PRR4Q16378 134 aa7.66□□□□□ -1.18
SMPD4-213ENST00000454468 LY6G6CO95867 125 aa7.65□□□□□ -1.18
SMPD4-213ENST00000454468 ANK2Q01484 3957 aa7.65□□□□□ -1.18
SMPD4-213ENST00000454468 C14orf177Q52M58 125 aa7.64□□□□□ -1.19
SMPD4-213ENST00000454468 FAM229BQ4G0N7 80 aa7.64□□□□□ -1.19
SMPD4-213ENST00000454468 APLNQ9ULZ1 77 aa7.63□□□□□ -1.19
SMPD4-213ENST00000454468 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
SMPD4-213ENST00000454468 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
SMPD4-213ENST00000454468 C16orf90A8MZG2 172 aa7.63□□□□□ -1.19
SMPD4-213ENST00000454468 NDUFC1O43677 76 aa7.62□□□□□ -1.19
SMPD4-213ENST00000454468 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms