RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 Q5XG85 94 aa8.92□□□□□ -0.98
UBE2D4-209ENST00000454428 TRAV12-1A0A0B4J245 112 aa8.91□□□□□ -0.98
UBE2D4-209ENST00000454428 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
UBE2D4-209ENST00000454428 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
UBE2D4-209ENST00000454428 Q6Q795 121 aa8.91□□□□□ -0.98
UBE2D4-209ENST00000454428 RPS10P5Q9NQ39 176 aa8.91□□□□□ -0.98
UBE2D4-209ENST00000454428 NDUFC2O95298 119 aa8.9□□□□□ -0.98
UBE2D4-209ENST00000454428 COX19Q49B96 90 aa8.9□□□□□ -0.98
UBE2D4-209ENST00000454428 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
UBE2D4-209ENST00000454428 LCE2BO14633 110 aa8.89□□□□□ -0.99
UBE2D4-209ENST00000454428 EIF4EBP3O60516 100 aaPredicted RBP8.89□□□□□ -0.99
UBE2D4-209ENST00000454428 S100PP25815 95 aa8.89□□□□□ -0.99
UBE2D4-209ENST00000454428 SLC25A34Q6PIV7 304 aa8.88□□□□□ -0.99
UBE2D4-209ENST00000454428 LAMTOR3Q9UHA4 124 aa8.88□□□□□ -0.99
UBE2D4-209ENST00000454428 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
UBE2D4-209ENST00000454428 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
UBE2D4-209ENST00000454428 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
UBE2D4-209ENST00000454428 A0A0G2JQZ4 141 aa8.84□□□□□ -0.99
UBE2D4-209ENST00000454428 Q1RN00 199 aa8.84□□□□□ -0.99
UBE2D4-209ENST00000454428 PRO1933Q9H354 126 aa8.84□□□□□ -0.99
UBE2D4-209ENST00000454428 MT2AP02795 61 aa8.83□□□□□ -1
UBE2D4-209ENST00000454428 MIEN1Q9BRT3 115 aa8.83□□□□□ -1
UBE2D4-209ENST00000454428 TMEM218A2RU14 115 aa8.82□□□□□ -1
UBE2D4-209ENST00000454428 LEPROTO15243 131 aa8.81□□□□□ -1
UBE2D4-209ENST00000454428 NPC2P61916 151 aa8.81□□□□□ -1
UBE2D4-209ENST00000454428 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
UBE2D4-209ENST00000454428 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
UBE2D4-209ENST00000454428 HINT1P49773 126 aaPredicted RBP8.79□□□□□ -1
UBE2D4-209ENST00000454428 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
UBE2D4-209ENST00000454428 MT1FP04733 61 aa8.78□□□□□ -1
UBE2D4-209ENST00000454428 COMMD7Q86VX2 200 aa8.78□□□□□ -1
UBE2D4-209ENST00000454428 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
UBE2D4-209ENST00000454428 J3QQQ9 107 aa8.77□□□□□ -1.01
UBE2D4-209ENST00000454428 AKR1D1P51857 326 aa8.77□□□□□ -1.01
UBE2D4-209ENST00000454428 IFITM2Q01629 132 aa8.77□□□□□ -1.01
UBE2D4-209ENST00000454428 DEFB105AQ8NG35 78 aa8.77□□□□□ -1.01
UBE2D4-209ENST00000454428 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
UBE2D4-209ENST00000454428 TAL2Q16559 108 aa8.75□□□□□ -1.01
UBE2D4-209ENST00000454428 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
UBE2D4-209ENST00000454428 NMUP48645 174 aa8.74□□□□□ -1.01
UBE2D4-209ENST00000454428 UQCC3Q6UW78 93 aa8.74□□□□□ -1.01
UBE2D4-209ENST00000454428 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
UBE2D4-209ENST00000454428 CLLU1Q5K131 121 aa8.73□□□□□ -1.01
UBE2D4-209ENST00000454428 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
UBE2D4-209ENST00000454428 Q75L30 129 aa8.73□□□□□ -1.01
UBE2D4-209ENST00000454428 CBY1Q9Y3M2 126 aa8.73□□□□□ -1.01
UBE2D4-209ENST00000454428 C20orf202A1L168 122 aa8.72□□□□□ -1.01
UBE2D4-209ENST00000454428 RHEBQ15382 184 aa8.72□□□□□ -1.01
UBE2D4-209ENST00000454428 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
UBE2D4-209ENST00000454428 H0Y8G0 127 aa8.71□□□□□ -1.02
UBE2D4-209ENST00000454428 COX7BP24311 80 aa8.71□□□□□ -1.02
UBE2D4-209ENST00000454428 OR13C6PQ8NH95 151 aa8.7□□□□□ -1.02
UBE2D4-209ENST00000454428 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
UBE2D4-209ENST00000454428 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
UBE2D4-209ENST00000454428 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
UBE2D4-209ENST00000454428 TCL1BO95988 128 aa8.68□□□□□ -1.02
UBE2D4-209ENST00000454428 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
UBE2D4-209ENST00000454428 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
UBE2D4-209ENST00000454428 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
UBE2D4-209ENST00000454428 LITAFQ99732 161 aa8.67□□□□□ -1.02
UBE2D4-209ENST00000454428 PLNP26678 52 aa8.66□□□□□ -1.02
UBE2D4-209ENST00000454428 LINC00308Q8TCZ7 52 aa8.66□□□□□ -1.02
UBE2D4-209ENST00000454428 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
UBE2D4-209ENST00000454428 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
UBE2D4-209ENST00000454428 PMCHL2Q9BQD1 86 aa8.65□□□□□ -1.02
UBE2D4-209ENST00000454428 HERVK_113P61574 105 aa8.64□□□□□ -1.03
UBE2D4-209ENST00000454428 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
UBE2D4-209ENST00000454428 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
UBE2D4-209ENST00000454428 HSBP1O75506 76 aa8.62□□□□□ -1.03
UBE2D4-209ENST00000454428 DPM2O94777 84 aa8.62□□□□□ -1.03
UBE2D4-209ENST00000454428 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
UBE2D4-209ENST00000454428 NEBP20929 6669 aa8.61□□□□□ -1.03
UBE2D4-209ENST00000454428 TRBV7-6A0A0J9YX20 115 aa8.59□□□□□ -1.03
UBE2D4-209ENST00000454428 IGKCP01834 107 aa8.59□□□□□ -1.03
UBE2D4-209ENST00000454428 LINC00310P59036 64 aa8.59□□□□□ -1.03
UBE2D4-209ENST00000454428 LEPROTL1O95214 131 aa8.58□□□□□ -1.04
UBE2D4-209ENST00000454428 E9PLD3 99 aa8.57□□□□□ -1.04
UBE2D4-209ENST00000454428 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
UBE2D4-209ENST00000454428 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
UBE2D4-209ENST00000454428 C20orf166-AS1Q96NR2 134 aa8.56□□□□□ -1.04
UBE2D4-209ENST00000454428 A0A1B0GWB2 263 aa8.55□□□□□ -1.04
UBE2D4-209ENST00000454428 TIMM17BO60830 172 aa8.55□□□□□ -1.04
UBE2D4-209ENST00000454428 Q96NJ1 140 aa8.55□□□□□ -1.04
UBE2D4-209ENST00000454428 TRBV7-7A0A0K0K1E9 115 aa8.54□□□□□ -1.04
UBE2D4-209ENST00000454428 A8MUU9 505 aa8.53□□□□□ -1.04
UBE2D4-209ENST00000454428 LINC00518Q8N0U6 118 aa8.53□□□□□ -1.04
UBE2D4-209ENST00000454428 LINC00846Q9NV44 126 aa8.53□□□□□ -1.04
UBE2D4-209ENST00000454428 SERF1AO75920 110 aa8.51□□□□□ -1.05
UBE2D4-209ENST00000454428 FABP4P15090 132 aa8.5□□□□□ -1.05
UBE2D4-209ENST00000454428 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
UBE2D4-209ENST00000454428 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
UBE2D4-209ENST00000454428 HSPB8Q9UJY1 196 aa8.49□□□□□ -1.05
UBE2D4-209ENST00000454428 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
UBE2D4-209ENST00000454428 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
UBE2D4-209ENST00000454428 CLEC2BQ92478 149 aa8.47□□□□□ -1.05
UBE2D4-209ENST00000454428 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
UBE2D4-209ENST00000454428 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
UBE2D4-209ENST00000454428 F8WEM9 126 aa8.45□□□□□ -1.06
UBE2D4-209ENST00000454428 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
UBE2D4-209ENST00000454428 A4D1N5 150 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms