RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ARPC5O15511 151 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 HERVK_113P63121 156 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 IL15RAQ13261 267 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 RPL39LQ96EH5 51 aaKnown RBP2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 SS18L2Q9UHA2 77 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 SCP2D1Q9UJQ7 156 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 ZFP30Q9Y2G7 519 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 HSPB11Q9Y547 144 aa2.25□□□□□ -2.05
SBDSP1-204ENST00000453858 LOC107984156A0A0G2JMH3 177 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 SDHAF1A6NFY7 115 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 I3L3M4 83 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 Q5XG85 94 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 ARL17AQ8IVW1 177 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 OBSCN-AS1Q96MR7 158 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 SPANXA1Q9NS26 97 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 MED9Q9NWA0 146 aa2.24□□□□□ -2.05
SBDSP1-204ENST00000453858 C9orf170A2RU37 121 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 A8MWL6 223 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 FABP9Q0Z7S8 132 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 AKR1C8PQ5T2L2 129 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 Q6ZUT4 128 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 Q8NDZ9 215 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 SMIM4Q8WVI0 70 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 CNBD2Q96M20 576 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 WDR61Q9GZS3 305 aaKnown RBP2.23□□□□□ -2.05
SBDSP1-204ENST00000453858 A0A1W2PRE2 83 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 MAP1LC3B2A6NCE7 125 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 HMGB3O15347 200 aaKnown RBP2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 ERC2-IT1O76042 136 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 CXorf1O96002 111 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 IGLC6P0CF74 106 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 ANKRD29Q8N6D5 301 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 MAP1LC3BQ9GZQ8 125 aa2.22□□□□□ -2.05
SBDSP1-204ENST00000453858 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 RGS5O15539 181 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 DEFB116Q30KQ4 102 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 FAM104BQ5XKR9 115 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
SBDSP1-204ENST00000453858 TRBV27A0A0K0K1C4 114 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 TMEM223A0PJW6 202 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 C7orf77A4D0Y5 90 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 A8MUN3 132 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 LST1O00453 97 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 PFDN1O60925 122 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 GCHFRP30047 84 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 POLR2KP53803 58 aaKnown RBP2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 TIMM21Q9BVV7 248 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 KCNIP2Q9NS61 270 aa2.2□□□□□ -2.06
SBDSP1-204ENST00000453858 FAM25AB3EWG3 89 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 FAM25CB3EWG5 89 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 FAM25GB3EWG6 89 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 NDUFC2O95298 119 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 S100A2P29034 98 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 SPRR1AP35321 89 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 AQP4P55087 323 aa2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 MRPS10P82664 201 aaKnown RBP2.19□□□□□ -2.06
SBDSP1-204ENST00000453858 LINC00862A6NCI5 91 aa2.18□□□□□ -2.06
SBDSP1-204ENST00000453858 F8VRH5 84 aa2.18□□□□□ -2.06
SBDSP1-204ENST00000453858 DEFA1P59665 94 aa2.18□□□□□ -2.06
SBDSP1-204ENST00000453858 CKS1BP61024 79 aa2.18□□□□□ -2.06
SBDSP1-204ENST00000453858 HIST1H2BAQ96A08 127 aa2.18□□□□□ -2.06
SBDSP1-204ENST00000453858 A8MUU9 505 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 C17orf112F2Z3M2 114 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 TRGC1P0CF51 173 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 C9orf153Q5TBE3 101 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 Q8IZM0 81 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 NKX6-2Q9C056 277 aaPredicted RBP2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 SPANXCQ9NY87 97 aa2.17□□□□□ -2.06
SBDSP1-204ENST00000453858 TRBV20OR9-2A0A075B6H5 130 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 A0A1B0GW54 56 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 K7ERS5 55 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 S100A1P23297 94 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 AKR1C3P42330 323 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 LSM3P62310 102 aaKnown RBP2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 RPS28P62857 69 aaKnown RBP2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 AMN1Q8IY45 258 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 CNFNQ9BYD5 112 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 CYSLTR1Q9Y271 337 aa2.16□□□□□ -2.06
SBDSP1-204ENST00000453858 F2Z2F3 143 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 H7C2G1 150 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 MRPS36P82909 103 aaKnown RBP2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 NDUFA5Q16718 116 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 Q5W150 140 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 C9orf62Q8N4C0 152 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 TOMM6Q96B49 74 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 Q9BRP9 147 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 Q9H521 79 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 TMEM167BQ9NRX6 74 aa2.15□□□□□ -2.07
SBDSP1-204ENST00000453858 TRAV9-1A0A075B6T8 112 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 BORCS7-ASMTA0A0B4J1R7 106 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 A0A1B0GX51 115 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 PLA2G10O15496 165 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 SRP19P09132 144 aaKnown RBP2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 ATP6V0CP27449 155 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 MT1XP80297 61 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms