RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	BAALC-AS2	P0C853	105 aa		5.46	□□□□□ -1.54
HCG18-238	ENST00000449544	LINC00310	P59036	64 aa		5.45	□□□□□ -1.54
HCG18-238	ENST00000449544	UBL5	Q9BZL1	73 aa		5.45	□□□□□ -1.54
HCG18-238	ENST00000449544		A0A0U1RQV1	116 aa		5.45	□□□□□ -1.54
HCG18-238	ENST00000449544	RBM3	P98179	157 aa	Known RBP	5.45	□□□□□ -1.54
HCG18-238	ENST00000449544	TIMM17B	O60830	172 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	CEND1	Q8N111	149 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	CSMD2	Q7Z408	3487 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	TRBV20-1	A0A075B6N2	111 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544		A0A1W2PNN7	141 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	TMEM256-PLSCR3	K7ERE1	68 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	PRR26	Q8N8Z3	221 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544	SLPI	P03973	132 aa		5.44	□□□□□ -1.54
HCG18-238	ENST00000449544		Q6JHZ5	121 aa		5.43	□□□□□ -1.54
HCG18-238	ENST00000449544	IGLV1-50	A0A075B6I6	118 aa		5.42	□□□□□ -1.54
HCG18-238	ENST00000449544	ZFHX4	Q86UP3	3567 aa		5.42	□□□□□ -1.54
HCG18-238	ENST00000449544		K7ERU9	68 aa		5.42	□□□□□ -1.54
HCG18-238	ENST00000449544	HIST1H4A	P62805	103 aa	Known RBP	5.42	□□□□□ -1.54
HCG18-238	ENST00000449544	NDUFC2	O95298	119 aa		5.41	□□□□□ -1.54
HCG18-238	ENST00000449544	SERTAD4-AS1	Q5TG53	156 aa		5.41	□□□□□ -1.54
HCG18-238	ENST00000449544	CCK	P06307	115 aa		5.41	□□□□□ -1.54
HCG18-238	ENST00000449544	FAM30A	Q9NZY2	134 aa		5.41	□□□□□ -1.54
HCG18-238	ENST00000449544	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.4	□□□□□ -1.54
HCG18-238	ENST00000449544	ANAPC11	Q9NYG5	84 aa		5.4	□□□□□ -1.54
HCG18-238	ENST00000449544		K7ERJ3	54 aa		5.4	□□□□□ -1.55
HCG18-238	ENST00000449544		Q8NBF4	154 aa		5.4	□□□□□ -1.55
HCG18-238	ENST00000449544	SMIM11B	Q8TCY0	68 aa		5.4	□□□□□ -1.55
HCG18-238	ENST00000449544	IGLV5-39	A0A0G2JS06	123 aa		5.4	□□□□□ -1.55
HCG18-238	ENST00000449544	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.39	□□□□□ -1.55
HCG18-238	ENST00000449544	PLAC8	Q9NZF1	115 aa		5.39	□□□□□ -1.55
HCG18-238	ENST00000449544	IGLV7-46	A0A075B6I9	117 aa		5.39	□□□□□ -1.55
HCG18-238	ENST00000449544	CLEC2B	Q92478	149 aa		5.38	□□□□□ -1.55
HCG18-238	ENST00000449544	ATP11AUN	Q6ZP68	121 aa		5.38	□□□□□ -1.55
HCG18-238	ENST00000449544	TLX1NB	P0CAT3	122 aa		5.37	□□□□□ -1.55
HCG18-238	ENST00000449544	PDE6G	P18545	87 aa		5.37	□□□□□ -1.55
HCG18-238	ENST00000449544	SSBP3-AS1	Q7Z2R9	100 aa		5.37	□□□□□ -1.55
HCG18-238	ENST00000449544	TAX1BP3	O14907	124 aa		5.36	□□□□□ -1.55
HCG18-238	ENST00000449544	OXT	P01178	125 aa		5.36	□□□□□ -1.55
HCG18-238	ENST00000449544	NDUFV3	P56181	108 aa	Known RBP	5.36	□□□□□ -1.55
HCG18-238	ENST00000449544	IGLV5-45	A0A087WSX0	123 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544		A0A087WSZ3	146 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	IGKV4-1	P06312	121 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	C9orf129	Q5T035	196 aa	Known RBP	5.35	□□□□□ -1.55
HCG18-238	ENST00000449544		Q6ZRX8	168 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	MTURN	Q8N3F0	131 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	VPREB1	P12018	145 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	RETNLB	Q9BQ08	111 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	KIAA0087	Q14695	138 aa		5.35	□□□□□ -1.55
HCG18-238	ENST00000449544	IGHV6-1	A0A0B4J1U7	121 aa		5.34	□□□□□ -1.55
HCG18-238	ENST00000449544		M0R2T5	61 aa		5.34	□□□□□ -1.55
HCG18-238	ENST00000449544	TSPEAR-AS2	P59090	65 aa		5.34	□□□□□ -1.55
HCG18-238	ENST00000449544	HIGD1B	Q9P298	99 aa		5.34	□□□□□ -1.55
HCG18-238	ENST00000449544	BPY2	O14599	106 aa		5.33	□□□□□ -1.56
HCG18-238	ENST00000449544	ADAMTSL4-AS1	Q5T5F5	129 aa		5.33	□□□□□ -1.56
HCG18-238	ENST00000449544	FXYD2	P54710	66 aa		5.33	□□□□□ -1.56
HCG18-238	ENST00000449544		A0A0B4J2C4	111 aa		5.32	□□□□□ -1.56
HCG18-238	ENST00000449544	C9orf92	A6NGG3	77 aa		5.31	□□□□□ -1.56
HCG18-238	ENST00000449544	SPINK1	P00995	79 aa		5.31	□□□□□ -1.56
HCG18-238	ENST00000449544		Q6ZRN7	208 aa	Predicted RBP	5.31	□□□□□ -1.56
HCG18-238	ENST00000449544		A0A096LNJ9	63 aa		5.31	□□□□□ -1.56
HCG18-238	ENST00000449544	URB1-AS1	Q96HZ7	61 aa		5.31	□□□□□ -1.56
HCG18-238	ENST00000449544	ST20-AS1	Q8NBB2	130 aa		5.3	□□□□□ -1.56
HCG18-238	ENST00000449544	C3orf22	Q8N5N4	141 aa		5.29	□□□□□ -1.56
HCG18-238	ENST00000449544		A0A1B0GX51	115 aa		5.28	□□□□□ -1.56
HCG18-238	ENST00000449544	C14orf132	Q9NPU4	83 aa		5.28	□□□□□ -1.56
HCG18-238	ENST00000449544	CASC2	Q6XLA1	102 aa		5.28	□□□□□ -1.56
HCG18-238	ENST00000449544		Q96NJ1	140 aa		5.27	□□□□□ -1.57
HCG18-238	ENST00000449544	SPRR4	Q96PI1	79 aa		5.27	□□□□□ -1.57
HCG18-238	ENST00000449544	C9orf118	A6NHY6	69 aa		5.27	□□□□□ -1.57
HCG18-238	ENST00000449544	ETDB	Q3ZM63	59 aa		5.27	□□□□□ -1.57
HCG18-238	ENST00000449544	KCNQ1DN	Q9H478	68 aa		5.27	□□□□□ -1.57
HCG18-238	ENST00000449544		Q6ZSA8	131 aa		5.26	□□□□□ -1.57
HCG18-238	ENST00000449544	LINC00575	Q6W349	94 aa		5.26	□□□□□ -1.57
HCG18-238	ENST00000449544		K7EP34	96 aa		5.26	□□□□□ -1.57
HCG18-238	ENST00000449544	TRIAP1	O43715	76 aa		5.26	□□□□□ -1.57
HCG18-238	ENST00000449544	COL7A1	Q02388	2944 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	DEFB116	Q30KQ4	102 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	C2orf91	Q6ZV80	131 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	WFDC13	Q8IUB5	93 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	SEC61B	P60468	96 aa	Known RBP	5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	FAM229B	Q4G0N7	80 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544	TEN1	Q86WV5	123 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544		A0A1W2PPM0	123 aa		5.25	□□□□□ -1.57
HCG18-238	ENST00000449544		B5MCH6	92 aa		5.24	□□□□□ -1.57
HCG18-238	ENST00000449544	ELOF1	P60002	83 aa	Known RBP	5.24	□□□□□ -1.57
HCG18-238	ENST00000449544	MP68	P56378	58 aa		5.24	□□□□□ -1.57
HCG18-238	ENST00000449544	IGLV6-57	P01721	117 aa		5.23	□□□□□ -1.57
HCG18-238	ENST00000449544	PANO1	I0J062	215 aa		5.23	□□□□□ -1.57
HCG18-238	ENST00000449544	PPDPFL	Q8WWR9	84 aa		5.23	□□□□□ -1.57
HCG18-238	ENST00000449544		J3KT08	172 aa		5.23	□□□□□ -1.57
HCG18-238	ENST00000449544	TRBV7-6	A0A0J9YX20	115 aa		5.22	□□□□□ -1.57
HCG18-238	ENST00000449544	SPEN	Q96T58	3664 aa	Known RBP	5.21	□□□□□ -1.58
HCG18-238	ENST00000449544	LINC00313	P59037	77 aa		5.21	□□□□□ -1.58
HCG18-238	ENST00000449544		Q6ZVQ6	151 aa		5.21	□□□□□ -1.58
HCG18-238	ENST00000449544		H3BT86	120 aa		5.21	□□□□□ -1.58
HCG18-238	ENST00000449544	LINC01546	A6NGU7	62 aa		5.2	□□□□□ -1.58
HCG18-238	ENST00000449544	SOSTDC1	Q6X4U4	206 aa		5.2	□□□□□ -1.58
HCG18-238	ENST00000449544	OBSCN-AS1	Q96MR7	158 aa		5.2	□□□□□ -1.58
HCG18-238	ENST00000449544	CHKB-CPT1B	H3BT56	60 aa		5.2	□□□□□ -1.58
HCG18-238	ENST00000449544	IGKV2D-30	A0A075B6S6	120 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms