RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
SMC6-207ENST00000448223 NF1P21359 2839 aa6.51□□□□□ -1.37
SMC6-207ENST00000448223 Q6ZQT0 140 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 C6orf48Q9UBA6 75 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 ITPR3Q14573 2671 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 H7BZZ5 65 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 FBN2P35556 2912 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 F8P00451 2351 aa6.5□□□□□ -1.37
SMC6-207ENST00000448223 ZNF702PQ9H963 129 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 LELP1Q5T871 98 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 PRLHP81277 87 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 Q9BRP9 147 aa6.49□□□□□ -1.37
SMC6-207ENST00000448223 A0A1B0GW54 56 aa6.48□□□□□ -1.37
SMC6-207ENST00000448223 UQCR11O14957 56 aa6.48□□□□□ -1.37
SMC6-207ENST00000448223 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.47□□□□□ -1.37
SMC6-207ENST00000448223 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 COA5Q86WW8 74 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 Q6ZSN1 163 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 IGSF10Q6WRI0 2623 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
SMC6-207ENST00000448223 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.37
SMC6-207ENST00000448223 LINC00315P59091 139 aa6.46□□□□□ -1.38
SMC6-207ENST00000448223 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.38
SMC6-207ENST00000448223 KIF25-AS1Q9Y6Z4 181 aa6.45□□□□□ -1.38
SMC6-207ENST00000448223 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
SMC6-207ENST00000448223 ATRQ13535 2644 aa6.45□□□□□ -1.38
SMC6-207ENST00000448223 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 LINC01600Q96MT4 127 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
SMC6-207ENST00000448223 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
SMC6-207ENST00000448223 KRTAP10-9P60411 292 aa6.43□□□□□ -1.38
SMC6-207ENST00000448223 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
SMC6-207ENST00000448223 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
SMC6-207ENST00000448223 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
SMC6-207ENST00000448223 BRI3O95415 125 aa6.42□□□□□ -1.38
SMC6-207ENST00000448223 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
SMC6-207ENST00000448223 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
SMC6-207ENST00000448223 CELSR2Q9HCU4 2923 aa6.41□□□□□ -1.38
SMC6-207ENST00000448223 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
SMC6-207ENST00000448223 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.38
SMC6-207ENST00000448223 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
SMC6-207ENST00000448223 UBR5O95071 2799 aaPredicted RBP6.39□□□□□ -1.39
SMC6-207ENST00000448223 Q8NBF4 154 aa6.39□□□□□ -1.39
SMC6-207ENST00000448223 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
SMC6-207ENST00000448223 KLK9Q2XQG4 91 aa6.38□□□□□ -1.39
SMC6-207ENST00000448223 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
SMC6-207ENST00000448223 HELZ2Q9BYK8 2649 aaKnown RBP6.38□□□□□ -1.39
SMC6-207ENST00000448223 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
SMC6-207ENST00000448223 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
SMC6-207ENST00000448223 MXRA5Q9NR99 2828 aa6.36□□□□□ -1.39
SMC6-207ENST00000448223 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
SMC6-207ENST00000448223 Q6YL49 198 aa6.36□□□□□ -1.39
SMC6-207ENST00000448223 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
SMC6-207ENST00000448223 ODF3L2Q3SX64 289 aa6.35□□□□□ -1.39
SMC6-207ENST00000448223 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
SMC6-207ENST00000448223 Q5XG85 94 aa6.35□□□□□ -1.39
SMC6-207ENST00000448223 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
SMC6-207ENST00000448223 Q1T7F1 81 aa6.34□□□□□ -1.39
SMC6-207ENST00000448223 DEFB113Q30KQ7 82 aa6.34□□□□□ -1.39
SMC6-207ENST00000448223 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.39
SMC6-207ENST00000448223 LITAFQ99732 161 aa6.33□□□□□ -1.4
SMC6-207ENST00000448223 NIPBLQ6KC79 2804 aaeCLIP6.33□□□□□ -1.43e-6■□□□□ 9.9
SMC6-207ENST00000448223 ITPR2Q14571 2701 aa6.32□□□□□ -1.4
SMC6-207ENST00000448223 MGAM2Q2M2H8 2515 aa6.31□□□□□ -1.4
SMC6-207ENST00000448223 K7EQZ3 153 aa6.31□□□□□ -1.4
SMC6-207ENST00000448223 Q6ZRU5 148 aa6.31□□□□□ -1.4
SMC6-207ENST00000448223 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
SMC6-207ENST00000448223 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
SMC6-207ENST00000448223 LINC00476Q8WZB0 136 aa6.3□□□□□ -1.4
SMC6-207ENST00000448223 A8MWP4 228 aa6.29□□□□□ -1.4
SMC6-207ENST00000448223 NOTCH1P46531 2555 aa6.29□□□□□ -1.4
SMC6-207ENST00000448223 CSMD2Q7Z408 3487 aa6.29□□□□□ -1.4
SMC6-207ENST00000448223 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
SMC6-207ENST00000448223 SMR3AQ99954 134 aa6.28□□□□□ -1.4
SMC6-207ENST00000448223 MAST4O15021 2626 aa6.28□□□□□ -1.4
SMC6-207ENST00000448223 MOBPQ13875 183 aa6.28□□□□□ -1.4
SMC6-207ENST00000448223 BSNQ9UPA5 3926 aa6.26□□□□□ -1.41
SMC6-207ENST00000448223 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
SMC6-207ENST00000448223 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
SMC6-207ENST00000448223 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
SMC6-207ENST00000448223 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
SMC6-207ENST00000448223 APCP25054 2843 aa6.25□□□□□ -1.41
SMC6-207ENST00000448223 EPM2AB3EWF7 344 aa6.25□□□□□ -1.41
SMC6-207ENST00000448223 Q6ZRX8 168 aa6.24□□□□□ -1.41
SMC6-207ENST00000448223 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
SMC6-207ENST00000448223 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
SMC6-207ENST00000448223 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
SMC6-207ENST00000448223 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
SMC6-207ENST00000448223 FAM104AQ969W3 186 aa6.23□□□□□ -1.41
SMC6-207ENST00000448223 LY6G6DO95868 133 aa6.22□□□□□ -1.41
SMC6-207ENST00000448223 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
SMC6-207ENST00000448223 HIVEP1P15822 2718 aa6.22□□□□□ -1.41
SMC6-207ENST00000448223 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
SMC6-207ENST00000448223 APLNQ9ULZ1 77 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms