RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PRLHP81277 87 aa13.21□□□□□ -0.29
APOE-204ENST00000446996 MUSTN1Q8IVN3 82 aa13.21□□□□□ -0.29
APOE-204ENST00000446996 VAMP8Q9BV40 100 aa13.21□□□□□ -0.29
APOE-204ENST00000446996 SPATA45Q537H7 98 aa13.2□□□□□ -0.3
APOE-204ENST00000446996 ETDCA0A1B0GVM5 59 aa13.19□□□□□ -0.3
APOE-204ENST00000446996 PAM16Q9Y3D7 125 aa13.19□□□□□ -0.3
APOE-204ENST00000446996 TRAV23DV6A0A075B6W5 121 aa13.18□□□□□ -0.3
APOE-204ENST00000446996 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
APOE-204ENST00000446996 TNXBP22105 4242 aa13.17□□□□□ -0.3
APOE-204ENST00000446996 OR13C6PQ8NH95 151 aa13.16□□□□□ -0.3
APOE-204ENST00000446996 B5MCH6 92 aa13.14□□□□□ -0.31
APOE-204ENST00000446996 ZNF73O43830 326 aaPredicted RBP13.14□□□□□ -0.31
APOE-204ENST00000446996 C14orf144Q96I85 54 aa13.14□□□□□ -0.31
APOE-204ENST00000446996 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
APOE-204ENST00000446996 SLC25A34Q6PIV7 304 aa13.13□□□□□ -0.31
APOE-204ENST00000446996 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
APOE-204ENST00000446996 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
APOE-204ENST00000446996 HINT1P49773 126 aaPredicted RBP13.12□□□□□ -0.31
APOE-204ENST00000446996 Q6ZRX8 168 aa13.11□□□□□ -0.31
APOE-204ENST00000446996 PRR26Q8N8Z3 221 aa13.11□□□□□ -0.31
APOE-204ENST00000446996 TRAV13-2A0A0B4J235 113 aa13.1□□□□□ -0.31
APOE-204ENST00000446996 FAM229BQ4G0N7 80 aa13.1□□□□□ -0.31
APOE-204ENST00000446996 HMCN2Q8NDA2 5059 aa13.1□□□□□ -0.31
APOE-204ENST00000446996 HIST1H4GQ99525 98 aa13.09□□□□□ -0.31
APOE-204ENST00000446996 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
APOE-204ENST00000446996 SMCR5Q8TEV8 140 aa13.08□□□□□ -0.32
APOE-204ENST00000446996 CRYGAP11844 174 aa13.07□□□□□ -0.32
APOE-204ENST00000446996 A4D1N5 150 aa13.06□□□□□ -0.32
APOE-204ENST00000446996 A6NDN8 102 aa13.06□□□□□ -0.32
APOE-204ENST00000446996 TRBV7-6A0A0J9YX20 115 aa13.05□□□□□ -0.32
APOE-204ENST00000446996 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
APOE-204ENST00000446996 Q9BRP9 147 aa13.04□□□□□ -0.32
APOE-204ENST00000446996 TAL2Q16559 108 aa13.03□□□□□ -0.32
APOE-204ENST00000446996 C2orf91Q6ZV80 131 aa13.03□□□□□ -0.32
APOE-204ENST00000446996 A0A087X002 238 aa13.02□□□□□ -0.33
APOE-204ENST00000446996 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
APOE-204ENST00000446996 ELOF1P60002 83 aaKnown RBP13□□□□□ -0.33
APOE-204ENST00000446996 ANAPC11Q9NYG5 84 aa13□□□□□ -0.33
APOE-204ENST00000446996 DHRS4-AS1Q9P1J3 65 aa13□□□□□ -0.33
APOE-204ENST00000446996 COX7BP24311 80 aa12.99□□□□□ -0.33
APOE-204ENST00000446996 A0A1B0GWB2 263 aa12.98□□□□□ -0.33
APOE-204ENST00000446996 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
APOE-204ENST00000446996 LINC00483Q53H64 154 aa12.97□□□□□ -0.33
APOE-204ENST00000446996 TYMSOSQ8TAI1 123 aa12.97□□□□□ -0.33
APOE-204ENST00000446996 KRTAP13-2Q52LG2 175 aa12.96□□□□□ -0.33
APOE-204ENST00000446996 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.33
APOE-204ENST00000446996 CEND1Q8N111 149 aa12.94□□□□□ -0.34
APOE-204ENST00000446996 UQCR10Q9UDW1 63 aa12.94□□□□□ -0.34
APOE-204ENST00000446996 CFC1BP0CG36 223 aa12.91□□□□□ -0.34
APOE-204ENST00000446996 CFC1P0CG37 223 aa12.91□□□□□ -0.34
APOE-204ENST00000446996 VAMP3Q15836 100 aa12.91□□□□□ -0.34
APOE-204ENST00000446996 GAGE2AQ6NT46 116 aa12.91□□□□□ -0.34
APOE-204ENST00000446996 A0A0B4J2C4 111 aa12.9□□□□□ -0.34
APOE-204ENST00000446996 TMEM238LA0A1B0GVL6 79 aa12.9□□□□□ -0.34
APOE-204ENST00000446996 A6NJY4 79 aa12.9□□□□□ -0.34
APOE-204ENST00000446996 SMIM6P0DI80 62 aa12.89□□□□□ -0.35
APOE-204ENST00000446996 CTAG1AP78358 180 aa12.89□□□□□ -0.35
APOE-204ENST00000446996 C12orf57Q99622 126 aa12.89□□□□□ -0.35
APOE-204ENST00000446996 HSD52Q0P140 79 aa12.88□□□□□ -0.35
APOE-204ENST00000446996 RAB37Q96AX2 223 aa12.88□□□□□ -0.35
APOE-204ENST00000446996 NHP2Q9NX24 153 aaKnown RBP12.88□□□□□ -0.35
APOE-204ENST00000446996 UBR4Q5T4S7 5183 aa12.87□□□□□ -0.35
APOE-204ENST00000446996 SPRR1BP22528 89 aa12.87□□□□□ -0.35
APOE-204ENST00000446996 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
APOE-204ENST00000446996 ST20-AS1Q8NBB2 130 aa12.85□□□□□ -0.35
APOE-204ENST00000446996 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
APOE-204ENST00000446996 FXYD2P54710 66 aa12.83□□□□□ -0.36
APOE-204ENST00000446996 SLC25A20O43772 301 aa12.82□□□□□ -0.36
APOE-204ENST00000446996 SSBP3-AS1Q7Z2R9 100 aa12.82□□□□□ -0.36
APOE-204ENST00000446996 LINC00304Q8N9R0 145 aa12.82□□□□□ -0.36
APOE-204ENST00000446996 LOC105371267A0A1B0GV96 52 aa12.81□□□□□ -0.36
APOE-204ENST00000446996 PRO1854Q9UHT4 67 aa12.81□□□□□ -0.36
APOE-204ENST00000446996 SPAG11AQ6PDA7 123 aa12.8□□□□□ -0.36
APOE-204ENST00000446996 LINC00575Q6W349 94 aa12.8□□□□□ -0.36
APOE-204ENST00000446996 TEX49A0A1B0GTD5 131 aa12.78□□□□□ -0.36
APOE-204ENST00000446996 IGLV5-48A0A075B6I7 105 aa12.77□□□□□ -0.37
APOE-204ENST00000446996 LAMTOR3Q9UHA4 124 aa12.76□□□□□ -0.37
APOE-204ENST00000446996 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
APOE-204ENST00000446996 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
APOE-204ENST00000446996 H0YGX0 51 aa12.75□□□□□ -0.37
APOE-204ENST00000446996 H7C2G1 150 aa12.75□□□□□ -0.37
APOE-204ENST00000446996 PRO1933Q9H354 126 aa12.75□□□□□ -0.37
APOE-204ENST00000446996 LINC01547P58512 204 aaPredicted RBP12.74□□□□□ -0.37
APOE-204ENST00000446996 MOBPQ13875 183 aa12.73□□□□□ -0.37
APOE-204ENST00000446996 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
APOE-204ENST00000446996 Q8NBF4 154 aa12.73□□□□□ -0.37
APOE-204ENST00000446996 TSPAN13O95857 204 aa12.72□□□□□ -0.37
APOE-204ENST00000446996 Q1RN00 199 aa12.72□□□□□ -0.37
APOE-204ENST00000446996 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
APOE-204ENST00000446996 SNCGO76070 127 aa12.7□□□□□ -0.38
APOE-204ENST00000446996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.7□□□□□ -0.38
APOE-204ENST00000446996 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
APOE-204ENST00000446996 SPINK1P00995 79 aa12.68□□□□□ -0.38
APOE-204ENST00000446996 SMIM29Q86T20 159 aa12.68□□□□□ -0.38
APOE-204ENST00000446996 Q8N377 158 aa12.68□□□□□ -0.38
APOE-204ENST00000446996 A0A1B0GX51 115 aa12.67□□□□□ -0.38
APOE-204ENST00000446996 Q6ZQY7 126 aa12.67□□□□□ -0.38
APOE-204ENST00000446996 LRP2P98164 4655 aa12.67□□□□□ -0.38
APOE-204ENST00000446996 RPS29P62273 56 aaKnown RBP12.66□□□□□ -0.38
APOE-204ENST00000446996 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms