RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TRAV12-1A0A0B4J245 112 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 LOC389332A0A1B0GUA5 103 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 TMEM238C9JI98 176 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 PPP1R17O96001 155 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 NPYP01303 97 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 VCX2Q9H322 139 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 JPT2Q9H910 190 aa3.66□□□□□ -1.82
SSXP3-201ENST00000442971 TRBV10-1A0A0K0K1A3 114 aa3.65□□□□□ -1.83
SSXP3-201ENST00000442971 M0QXV9 152 aa3.65□□□□□ -1.83
SSXP3-201ENST00000442971 ORMDL2Q53FV1 153 aa3.65□□□□□ -1.83
SSXP3-201ENST00000442971 CEND1Q8N111 149 aa3.65□□□□□ -1.83
SSXP3-201ENST00000442971 C3orf22Q8N5N4 141 aa3.65□□□□□ -1.83
SSXP3-201ENST00000442971 TRBV25-1A0A075B6N4 114 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 A0A1B0GV72 72 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 E9PLD3 99 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 M0R381 172 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 SNAI2O43623 268 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 PCP2Q8IVA1 136 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
SSXP3-201ENST00000442971 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 TMSB15BA0A087X1C1 80 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 IGHV1-58A0A0C4DH39 117 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 A0A1B0GUV1 79 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 F8VRH5 84 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 RPL32P62910 135 aaKnown RBP3.63□□□□□ -1.83
SSXP3-201ENST00000442971 RPL24P83731 157 aaKnown RBP3.63□□□□□ -1.83
SSXP3-201ENST00000442971 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
SSXP3-201ENST00000442971 CHCHD10Q8WYQ3 142 aaPredicted RBP3.63□□□□□ -1.83
SSXP3-201ENST00000442971 TRAV21A0A0B4J279 112 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 IGKV3OR2-268A0A0C4DH90 116 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 MYMXA0A1B0GTQ4 84 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 FXYD2P54710 66 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 HERVK_113P61574 105 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 SPANXN1Q5VSR9 72 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 RAB37Q96AX2 223 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 HIST1H4GQ99525 98 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
SSXP3-201ENST00000442971 SPANXB1Q9NS25 103 aaPredicted RBP3.62□□□□□ -1.83
SSXP3-201ENST00000442971 NHP2Q9NX24 153 aaKnown RBP3.62□□□□□ -1.83
SSXP3-201ENST00000442971 TRBV20-1A0A075B6N2 111 aa3.61□□□□□ -1.83
SSXP3-201ENST00000442971 SMKR1H3BMG3 65 aa3.61□□□□□ -1.83
SSXP3-201ENST00000442971 SPINK1P00995 79 aa3.61□□□□□ -1.83
SSXP3-201ENST00000442971 ZNF80P51504 273 aaPredicted RBP3.61□□□□□ -1.83
SSXP3-201ENST00000442971 FAM74A4Q5TZK3 123 aa3.61□□□□□ -1.83
SSXP3-201ENST00000442971 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
SSXP3-201ENST00000442971 TOMM6Q96B49 74 aa3.61□□□□□ -1.83
SSXP3-201ENST00000442971 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
SSXP3-201ENST00000442971 IGKV3D-20A0A0C4DH25 116 aa3.6□□□□□ -1.83
SSXP3-201ENST00000442971 H3BMG7 143 aa3.6□□□□□ -1.83
SSXP3-201ENST00000442971 RNASE3P12724 160 aaKnown RBP3.6□□□□□ -1.83
SSXP3-201ENST00000442971 Q8N377 158 aa3.6□□□□□ -1.83
SSXP3-201ENST00000442971 TMEM141Q96I45 108 aa3.6□□□□□ -1.83
SSXP3-201ENST00000442971 SCGB3A1Q96QR1 104 aa3.6□□□□□ -1.83
SSXP3-201ENST00000442971 C9orf92A6NGG3 77 aa3.59□□□□□ -1.83
SSXP3-201ENST00000442971 NAA38Q9BRA0 125 aaKnown RBP3.59□□□□□ -1.83
SSXP3-201ENST00000442971 CYSLTR1Q9Y271 337 aa3.59□□□□□ -1.83
SSXP3-201ENST00000442971 IGLV5-45A0A087WSX0 123 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 K7ERJ3 54 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 BCE1O60756 84 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 S100A4P26447 101 aaKnown RBP3.58□□□□□ -1.84
SSXP3-201ENST00000442971 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 SPANXA1Q9NS26 97 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 PRO0461Q9UI25 63 aa3.58□□□□□ -1.84
SSXP3-201ENST00000442971 C11orf86A6NJI1 115 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 H3BVH4 76 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 SLC25A20O43772 301 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 C2orf66Q6UXQ4 117 aa3.57□□□□□ -1.84
SSXP3-201ENST00000442971 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
SSXP3-201ENST00000442971 SMAGPQ0VAQ4 97 aa3.56□□□□□ -1.84
SSXP3-201ENST00000442971 PMVKQ15126 192 aa3.56□□□□□ -1.84
SSXP3-201ENST00000442971 TEN1Q86WV5 123 aa3.56□□□□□ -1.84
SSXP3-201ENST00000442971 Q8NBF4 154 aa3.56□□□□□ -1.84
SSXP3-201ENST00000442971 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 CKS1BP61024 79 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 C20orf166-AS1Q96NR2 134 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 TTTY13Q9BZ97 58 aa3.55□□□□□ -1.84
SSXP3-201ENST00000442971 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 SDHAF1A6NFY7 115 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 IGIPA6NJ69 53 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 MGPP08493 103 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 XCL1P47992 114 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 POLR2KP53803 58 aaKnown RBP3.54□□□□□ -1.84
SSXP3-201ENST00000442971 RPL37P61927 97 aaKnown RBP3.54□□□□□ -1.84
SSXP3-201ENST00000442971 PRO1854Q9UHT4 67 aa3.54□□□□□ -1.84
SSXP3-201ENST00000442971 LOC107984156A0A0G2JMH3 177 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 J3QQQ9 107 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms